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PLM1_30_b1_sep16_scaffold_3783

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_3783_1
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(80..1099)
DNA (1020bp) protein (340aa)
Abc transporter related protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDA2_VERMA
ABC transporter
Abc transporter related protein {ECO:0000313|EMBL:AEB46132.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_30_b1_sep16_scaffold_3783_2
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1109..1939)
DNA (831bp) protein (277aa)
ABC-type transporter, integral membrane subunit Tax=Frankia sp. CN3 RepID=G6H3N2_9ACTO
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP82050.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_30_b1_sep16_scaffold_3783_3
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1936..2895)
DNA (960bp) protein (320aa)
ABC transporter, permease protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KMA3_9ACTO
ABC transporter, permease protein {ECO:0000313|EMBL:EKX61615.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
binding-protein-dependent transport system inner membrane protein
PLM1_30_b1_sep16_scaffold_3783_4
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2892..4073)
DNA (1182bp) protein (394aa)
sugar ABC transporter substrate-binding protein Tax=Frankia sp. BCU110501 RepID=UPI00035D3B47
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KES09004.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
extracellular solute-binding protein
PLM1_30_b1_sep16_scaffold_3783_5
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4217..4666)
DNA (450bp) protein (150aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=Mycobacterium smegmatis JS623 RepID=L0ISU4_MYCSM
Putative response regulator {ECO:0000313|EMBL:GAF48590.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PLM1_30_b1_sep16_scaffold_3783_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(4663..6561)
DNA (1899bp) protein (633aa)
Amino acid permease-associated region Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7T1_CHLAD
amino acid permease-associated protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3783_7
unknown

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comp(6569..6757)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_3783_8
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6942..7301)
DNA (360bp) protein (120aa)
hypothetical protein Tax=Streptomyces somaliensis RepID=UPI00029B43AD
Putative uncharacterized protein {ECO:0000313|EMBL:EFL07527.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_3783_9
unknown

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comp(7312..7473)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_3783_10
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7490..7942)
DNA (453bp) protein (151aa)
NAD-dependent epimerase/dehydratase (Fragment) Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I5J0_9PSEU
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EOD65739.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
NAD-dependent epimerase/dehydratase
Displaying 10 items

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