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PLM1_30_b1_sep16_scaffold_3983

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_3983_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1..579
DNA (579bp) protein (193aa)
translation elongation factor Tu (EC:2.7.7.4)
Elongation factor Tu Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AV25_FRADG
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_30_b1_sep16_scaffold_3983_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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601..906
DNA (306bp) protein (102aa)
30S ribosomal protein S10 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RS10_ACIC1
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_3983_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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903..1559
DNA (657bp) protein (219aa)
50S ribosomal protein L3 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWE4_PSEUX
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_30_b1_sep16_scaffold_3983_4
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1559..2236
DNA (678bp) protein (226aa)
50S ribosomal protein L4 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W3S5_9ACTO
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
50S ribosomal protein L4P
PLM1_30_b1_sep16_scaffold_3983_5
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2233..2520
DNA (288bp) protein (96aa)
50S ribosomal protein L23 Tax=Streptomyces ipomoeae 91-03 RepID=L1KRE0_9ACTO
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
50S ribosomal protein L23
PLM1_30_b1_sep16_scaffold_3983_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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2523..3353
DNA (831bp) protein (277aa)
50S ribosomal protein L2 Tax=Actinopolymorpha alba RepID=UPI000382145A
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_3983_7
Planobispora rosea, Planobispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3643..3984
DNA (342bp) protein (114aa)
50S ribosomal protein L22 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MY89_9ACTO
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Planobispora.;" source="Planobispora rosea.;"
50S ribosomal protein L22
PLM1_30_b1_sep16_scaffold_3983_8
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3984..4841
DNA (858bp) protein (286aa)
30S ribosomal protein S3 Tax=Nocardiopsis RepID=UPI0003484A52
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_30_b1_sep16_scaffold_3983_9
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4849..5265
DNA (417bp) protein (139aa)
50S ribosomal protein L16 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UTV7_9MICO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
50S ribosomal protein L16
PLM1_30_b1_sep16_scaffold_3983_10
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

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5271..5480
DNA (210bp) protein (70aa)
50S ribosomal protein L29 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTF7_ACEAZ
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2-1.;"
50S ribosomal protein L29
PLM1_30_b1_sep16_scaffold_3983_11
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5477..5761
DNA (285bp) protein (95aa)
30S ribosomal protein S17 Tax=Streptomyces sp. BoleA5 RepID=UPI00036BB4EB
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
rpsQ; 30S ribosomal protein S17
PLM1_30_b1_sep16_scaffold_3983_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5793..6161
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y524_THEBD
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
rplN; 50S ribosomal protein L14
PLM1_30_b1_sep16_scaffold_3983_13
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6164..6478
DNA (315bp) protein (105aa)
50S ribosomal protein L24 Tax=Mycobacterium RepID=H8IRL4_MYCIA
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. avium 2285 (S).;"
PLM1_30_b1_sep16_scaffold_3983_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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6494..7063
DNA (570bp) protein (190aa)
50S ribosomal protein L5 Tax=Frankia sp. EUN1f RepID=D3CUT7_9ACTO
50S ribosomal protein L5P
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3983_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7126..7311
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWD1_PSEUX
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_30_b1_sep16_scaffold_3983_16
Gordonia sihwensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7328..7648
DNA (321bp) protein (107aa)
30S ribosomal protein S8 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LGK7_9ACTO
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sihwensis NBRC 108236.;"
rpsH; 30S ribosomal protein S8
Displaying 16 items

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