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PLM1_30_b1_sep16_scaffold_1611_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1..978)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 342.0
  • Bit_score: 286
  • Evalue 3.10e-74
transcription-repair coupling factor Tax=Cellulomonas sp. JC225 RepID=UPI0003772D1C similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 343.0
  • Bit_score: 289
  • Evalue 3.40e-75
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 342.0
  • Bit_score: 286
  • Evalue 6.30e-75

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Taxonomy

Cellulomonas flavigena → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGCGCCTCACCCCCCTGCTCGACCGCTGGAGCGACGACCCCGCCTTCGCCGAGCTGCTCGGCGGGCTCGACCCGCACGACGGCAGCCCACGGCCCGAGGTGGTCGTCCCCGACGTGGCCAGGGCGTTCCTGCTGGCCGGGATCGCCAAGGCCGGCGGGCGGCTGGTGGTCGTCACCACCGCCACCACCGCCGACGCCGAGGCCCTGGCCGCCGACGTCGCCGCCTTCCTCGGGCCCGACTCGGCGGCCACCTTCCCGGCCTGGGAGACCCTGCCCCACGAGCGGCTCTCGCCCCGCTCCGAGACCGTGGCCGCCCGCCTGCGCCTGCTCCACCGGCTCGGCCTGCCCGACCTCGGCGGGCTGCGGCTGGTGACGGTCCCGGCGCGGGCGATGATGCAGCCGCTCGCCCCCGGGCTGGACGCGGTCGACCCGGTCCGGGTCGCCACCGGCGACCGGGTCGACCTCGAGGAGCTGCTGGAGCGGCTGGTGGCCGCCGGCTACTCGCGCACCGACATGGTCGAGCGCCGGGGCGAGGTGGCCGTCCGGGGCGGCCTGGTCGACTTCTTCCCGCCGGGCGAGGACCACCCGGTCCGGGTCGAGCTCTGGGGCGACGAGGTCGAGAGCATCCGGTCGTTCGCGGTGTCGAGCCAGCGCTCCCTGACCGAGCTGCCCGAGGTCGAGGCCTGGCCGTGCCGCGAGGTGCGTCTGGGCGAGGCCGAGCGGGGCCGGGCCCGTCAGCTCGCCCGCGAGGTGCCGGTGGCCGGCGACCTGCTCGCCCAGGTGGCCGAGGGCCTCGACGTCGACGGGGTCGAGTCGCTGCTGCCGCTGCTGTTCGACGAGCTCCGGCCACTGCCGGCCTACCTGCCCACCGACGCCCTCCTGGTGCTGGTCGACCCCAAGCGCACCCTCGACCGGGCCGAGGAGGTCCGCATCCAGGCCGACGAGGCCGCCCAGGCCTCCTGGGGCAGCGCCGCCGAG
PROTEIN sequence
Length: 326
VRLTPLLDRWSDDPAFAELLGGLDPHDGSPRPEVVVPDVARAFLLAGIAKAGGRLVVVTTATTADAEALAADVAAFLGPDSAATFPAWETLPHERLSPRSETVAARLRLLHRLGLPDLGGLRLVTVPARAMMQPLAPGLDAVDPVRVATGDRVDLEELLERLVAAGYSRTDMVERRGEVAVRGGLVDFFPPGEDHPVRVELWGDEVESIRSFAVSSQRSLTELPEVEAWPCREVRLGEAERGRARQLAREVPVAGDLLAQVAEGLDVDGVESLLPLLFDELRPLPAYLPTDALLVLVDPKRTLDRAEEVRIQADEAAQASWGSAAE