ggKbase home page

PLM1_30_b1_sep16_scaffold_360_16

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(14897..15097)

Top 3 Functional Annotations

Value Algorithm Source
regulator Tax=Frankia sp. BMG5.12 RepID=UPI000366FCF2 similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 63.0
  • Bit_score: 88
  • Evalue 2.30e-15
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 66.0
  • Bit_score: 86
  • Evalue 1.90e-15
Uncharacterized protein {ECO:0000313|EMBL:AJK59595.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 66.0
  • Bit_score: 86
  • Evalue 9.50e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis lurida → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGAAGGTGGACCTCGTGACCGCGAAATGGCGCAAGAGCAGCCACAGCAGCAACAACGGCTGTGTCGAGGTGGCCCGCAGCGGCGACCAGATCGCCGTGCGAGATTCCAAGGACCCCTCTGGTGCCGTGCTGCTGTTCACCGCCCACGAATGGCGGGCGTTCCTCGCCGGCGTGCGGGATGGGGAGTTCGACAGCCCCTAA
PROTEIN sequence
Length: 67
MKVDLVTAKWRKSSHSSNNGCVEVARSGDQIAVRDSKDPSGAVLLFTAHEWRAFLAGVRDGEFDSP*