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PLM1_30_b1_sep16_scaffold_2395_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1126..5154)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 1351.0
  • Bit_score: 1728
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 1351.0
  • Bit_score: 1728
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RPOC_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 1352.0
  • Bit_score: 1728
  • Evalue 0.0

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 4029
GTGCTCGACGTCAACTACTTCGACGAGCTGCGGATCGGCCTGGCCACGGCCGAGCAGATCCGCATGTGGTCAAACGGCGAGGTCCGCAAGCCGGAGACGATCAACTACCGGACCCTCAAGCCCGAGAAGGACGGCCTGTTCTGCGAGAAGATCTTCGGGCCGACGCGGGACTGGGAGTGCTACTGCGGCAAGTACAAGCGCGTCCGCTTCAAGGGCATCATCTGTGAGCGCTGTGGCGTCGAGGTCACCCGGGCCAAGGTGCGGCGCGAGCGCATGGGCCACATCGAGCTGGCCGCGCCCGTCACCCACATCTGGTACGTCAAGGGCGTGCCGAGCCGGCTCGGTTACCTACTCGACATGGCCCCCAAGGACCTCGAGAAGATCATCTACTTCGCGGCCAACGTGGTGACCTGGGTCGACGACGACCGCCGTCACGACGACCTGCCCCGGGTCGAGACCGAGCTGGCGCACGAGCGCGAGCAGGTCGAGGTCGACAAGCAGAAGCGCGAAGAGGAGATCAAGGCCCAGCTGGAGGCCAACCTGGCCGAGCTGGAGGCCCAGGGGGCAAAGTCCGACCAGCGCCGCAAGGCCCGGAACGAGGCCGAGCGGGCGTTCAAGGACGTGCGCGAGAAGGCCGCGACCCGGGTCGAGCTGCTCGAGCGCATCCTCGACGTGTTCAAGAACATGTCGCCCAAGCAGCTGCTGGCCGACGACCAGTACTACCGCGAGCTGCGTGACCGCTTCGGCGAGTACTTCTCGGCCGGCATGGGCGCCGACGCCATCAAGGACCTGCTGCTGCGCGAGGGGGTCGAGGAGGAGCAGGCCCGCCTGCGCGAGGTCATCGCCACCTCCAAGGGCCAGAAGCAGCAGCGGGCCATCAAGCGCCTGCGGGTCGTCTCGGCCTTCATCGGCCGCCGCAACTCGCCGCTGGGCATGGTGCTCGACTGCGTCCCGGTGATCCCGCCCGACCTGCGCCCGATGGTGCAGCTGGACGGCGGCCGGTTCGCCACCAGCGACCTGAACGACCTGTACCGGCGGGTCATCAACCGCAACAACCGCCTCAAGCGGCTGCTGGACCTGGGCGCGCCCGAGATCATCGTCAACAACGAGAAGCGCATGCTCCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGTGGCCGCCCGGTCACCGGGCCCGGCAACCGGCCCCTCAAGAGCCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGGGTCGACTACTCGGGCCGCTCGGTCATCGTGGTCGGTCCCGAGCTGAAGCTGCACCAGTGCGGGCTGCCCAAGCAGATGGCCCTTGAGCTGTTCAAGCCGTTCGTGATGAAGCGGCTGGTCGACCTGTCGTACGCGCAGAACATCAAGTCGGCCAAGCGCATGGTCGAGCGTTCCCGGCCTCAGGTCTGGGACGTGCTCGAGGAGGTCATCCGCGAGCATCCGGTGCTGCTCAACCGGGCCCCGACCCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCCGTGCTGGTCGAGGGCAAGGCCATCCAGATCCACCCGCTGGTCTGTAAGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCCCTGTCGTCCGAGGCCCAGGCCGAGGCGCGGGTGCTGATGCTGTCGGTCAACAACATCCTGTCGCCGGCCAACGGCCGCCCGATCGCCATCCCGACCCACGAGATGGTCCTTGGCATCTACTTCCTGACCTACAAGGAAGAGGCCAAGCCGGAGACGGCCAAGTCCAAGAGCAAGGCCAAGAGCAACGGGGACGGGCCGCACCTGCCGATCTTCGGGTCGCTGGCCGAGGCCGTCATGGCCCACGACTTCAAGTCGATCGGCCTCCAGGACGCGATCGTCGTCCGGCTGCCCGAGGCCAAGGCCGCGGTGGCCGAGGACGGGGCGACCAAGGTCGAGACCACGGTCGGGCGCCTGCTGTTCAACGAGGCCCTGCCCGAGGACTTCCCCTACATCAACGAGACCCTGCAGAGCCGCGAGCTGACCAACCTGGTCTCGCGGGTCGCCGACCGCTACGACCAGACCGAGACCGCCGAGGTGCTGAACAAGCTCAAGACCCTCGGCTTCCACTGGGCGTCGCGGGCCGGGGTCACCGTGTCCATCCAGGACGTGCTCAAGCCGCCGCGCAAGCAGCAGATCCTCGACGAGTTCGAGAAGCGCGCCGAGAAGGTCGAGTCCCAGTTCCGCCGGGGCATCATCACCGACGACGAGCGCCGTCAGGAGCTCATCGAGATCTGGACCGAGGCCACCGAGCGGGTCCGCGAGGACATGGAGGAGCGGTTCCGCCAGGAGCCGTTCAACCCCATCTACATGATGGCCACCTCGGGCGCCCGCGGGAACATGACCCAGGTCCGGCAGATCGCCGGGATGCGCGGGCTGGTCGCCAACCCCAAGGGCGACATCATCCCGCGGCCCATCAAGGCCAACTTCCGCGAGGGCCTGTCGGTGCTCGAGTACTTCATCTCGACCCACGGCGCCCGCAAGGGGCTGGCCGACACCGCCCTGCGCACGGCCGACTCCGGCTACCTGACCAGGCGGCTGGTCGACGTGACCCAGGACGTGATCGTCCGCGAGAGCGACTGCGGCACCGAGCGCGGCATCCCGGTGACCATGGCCGTGCAGCGGCCGATCCCTGGCGGCAAGAAGGGCGAGTTCGAGTGGGTCCGGCCGCGCGCGGTCGAGAGCCAGGCCCTGTCCCGGATCCTGGCCGAGACCGTCATGGACCCGGCCGGCAAGGGCAAGCAGGTCCTGGTCGAGGCCGGCACCGAGATCGGCGAAGAGGTGATCGACCTGCTGGTCGAGCACGGCGTCGACGAGGTGCTGTGCCGCTCGGTGCTGACCTGCGACTCCAAGGTCGGGGTCTGCCAGATGTGCTACGGCCGCAGCCTGGCCAACAACCGGCTGGTCGACATCGGCGAGGCGGTCGGCATCATCGCCGCCCAGTCGATCGGCGAGCCCGGCACCCAGCTGACCATGCGGACCTTCCACACCGGCGGCATCGCCGGTGAGGACATCACCCACGGCCTGCCGCGGGTGCAGGAGCTGTTCGAGGCCCGCACCCCCAAGGGCATGACCCCCATCGCCGAGTTCTCCGGCCGGGTCGGGATCGAGCACGTCGAGAAGGGCGTGCAGGTCACCGTGACCTCGGACGAGGGCGAGGAGTGGGTGGCCATCGTGCCCCGGCGGGCCCGGCTCCGGGTCGAGGACGGCCAGGAGGTCGAGGTCGGCCAGCCGATCATCGACGGCATCCCCAACCCCAAGGAGATGCTGCGGGTGCTCGGGATCCGGGCCACCCAGCGGCACCTGGTCGAGCAGGTCCAGCAGGTCTACACCAGCCAGGGTGTGACCATCCACGACAAGCACATCGAGCTGATCGTCCGCCAGATGCTCAAGCGGGTGACCGTGCTCGAGGGCGGCGACACCCAGCTGCTCCCCGGCGAGCTGATCGAGCGGGCGACGTTCGAGCGGGCCAACCGGGAGGCGCTGGAGGCTGGCAACACGCCCGCCAACGGCCGTCCCGAGCTGCTCGGCATCACCAAGGCGTCGCTGGCCACCGAGTCGTGGCTGTCGGCGGCCTCCTTCCAGGAGACCACCAGGGTGCTGACCGAGGCGGCCATCGAGGGCAAGAGCGACTCGCTGATCGGCCTCAAGGAGAACGTCATCATCGGCAAGCTGATCCCGGCCGGGACCGGCATGGTGCGCTACCGCAGCGTCACCCCGGTCCTGACCGAGATCCCCGCGGCCGCCTACGGGGTCGACGCCTTCGGCGACGCCTACGAGACCTACAGCGACGACGTCTACTACGCGGAAGACGGCACCGCCTACCAGGTCCCGGTCGGCACCGACGTCGGCACCGACACCGAGGGCAACGGCGAGCTGGTCGACGTGGACGCCGGTGCCTACACCACCGACGACTACCAGACGTTCGAGGACCAGCAGCAGCCCCAGCAGTAA
PROTEIN sequence
Length: 1343
VLDVNYFDELRIGLATAEQIRMWSNGEVRKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYVKGVPSRLGYLLDMAPKDLEKIIYFAANVVTWVDDDRRHDDLPRVETELAHEREQVEVDKQKREEEIKAQLEANLAELEAQGAKSDQRRKARNEAERAFKDVREKAATRVELLERILDVFKNMSPKQLLADDQYYRELRDRFGEYFSAGMGADAIKDLLLREGVEEEQARLREVIATSKGQKQQRAIKRLRVVSAFIGRRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKQMALELFKPFVMKRLVDLSYAQNIKSAKRMVERSRPQVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPVLVEGKAIQIHPLVCKAFNADFDGDQMAVHVPLSSEAQAEARVLMLSVNNILSPANGRPIAIPTHEMVLGIYFLTYKEEAKPETAKSKSKAKSNGDGPHLPIFGSLAEAVMAHDFKSIGLQDAIVVRLPEAKAAVAEDGATKVETTVGRLLFNEALPEDFPYINETLQSRELTNLVSRVADRYDQTETAEVLNKLKTLGFHWASRAGVTVSIQDVLKPPRKQQILDEFEKRAEKVESQFRRGIITDDERRQELIEIWTEATERVREDMEERFRQEPFNPIYMMATSGARGNMTQVRQIAGMRGLVANPKGDIIPRPIKANFREGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVTQDVIVRESDCGTERGIPVTMAVQRPIPGGKKGEFEWVRPRAVESQALSRILAETVMDPAGKGKQVLVEAGTEIGEEVIDLLVEHGVDEVLCRSVLTCDSKVGVCQMCYGRSLANNRLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGIAGEDITHGLPRVQELFEARTPKGMTPIAEFSGRVGIEHVEKGVQVTVTSDEGEEWVAIVPRRARLRVEDGQEVEVGQPIIDGIPNPKEMLRVLGIRATQRHLVEQVQQVYTSQGVTIHDKHIELIVRQMLKRVTVLEGGDTQLLPGELIERATFERANREALEAGNTPANGRPELLGITKASLATESWLSAASFQETTRVLTEAAIEGKSDSLIGLKENVIIGKLIPAGTGMVRYRSVTPVLTEIPAAAYGVDAFGDAYETYSDDVYYAEDGTAYQVPVGTDVGTDTEGNGELVDVDAGAYTTDDYQTFEDQQQPQQ*