ggKbase home page

PLM1_30_b1_sep16_scaffold_2395_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(5155..5967)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 274.0
  • Bit_score: 409
  • Evalue 5.30e-112
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 274.0
  • Bit_score: 409
  • Evalue 2.60e-111
DNA-directed RNA polymerase subunit beta Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9S2_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 274.0
  • Bit_score: 409
  • Evalue 1.90e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 813
CCGATCGACGTCATCCTCAACCCGCTCGGCGTGCCGAGCCGGATGAACATCGGCCAGGTGCTGGAGACCCACCTCGGCTGGGTGGCCGCCCACGGCTGGTCGTTCGACACCTTGCCCGGCTGGGCAAAGGAGACCGGCTGGGCCAAGGAGCAGGGCCGCCAGGACGTGACGCGGCCGCTCGGCACCCCGGTGTTCGACGGCGCCAACGAGGAGGCCATCGAGGACCTGCTCACGGCCACCCTCGGCACCTACGAGGACCCGATCGACGGCGAGACCCACAAGCTGGTCGACGCCGAGGGCAAGGCGATGCTGTTCGACGGCCGCTCCGGCGAGCCGTACCCGACCCCGGTCACCGTCGGCTTCATCTACATCATGAAGCTGCTGCACCTGGTGGACGACAAGATCCACGCCCGCTCCACCGGCCCCTACTCGATGATCACCCAGCAGCCGCTGGGCGGGAAGGCGCAGTTCGGTGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCCCTCGAGGCCTACGGCGCCGCCTACGCCCTGCAGGAGCTGCTCACCATCAAGTCCGACGACGTCCTGGGCCGGGTGAAGGTCTACGAGGCGATCGTCAAGGGCGAGAACATCCCCGAGCCCGGCATCCCTGAGTCCTTCAAGGTGCTGATCAAGGAGATGCAGTCGCTCTGCCTGAACGTCGAGGTGCTCTCGGCCGAAGGCCAGGAGATCGAGATGCGGGAGACCGACGAGGACGTGTTCCGAGCCGCCGAGGAGCTAGGTATCGACCTCTCGCGGCGTGAGCCTTCGTCGGTCGAGGAGGTTTAA
PROTEIN sequence
Length: 271
PIDVILNPLGVPSRMNIGQVLETHLGWVAAHGWSFDTLPGWAKETGWAKEQGRQDVTRPLGTPVFDGANEEAIEDLLTATLGTYEDPIDGETHKLVDAEGKAMLFDGRSGEPYPTPVTVGFIYIMKLLHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVLGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSAEGQEIEMRETDEDVFRAAEELGIDLSRREPSSVEEV*