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PLM1_30_b1_sep16_scaffold_5400_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 894..1295

Top 3 Functional Annotations

Value Algorithm Source
HxlR family transcriptional regulator Tax=Amycolatopsis nigrescens RepID=UPI000370D4AE similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 120.0
  • Bit_score: 123
  • Evalue 1.30e-25
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 111.0
  • Bit_score: 123
  • Evalue 3.70e-26
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ABW12288.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 120.0
  • Bit_score: 123
  • Evalue 1.90e-25

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGTCTCACATTCCGGGACAGGCCGACCAGCGATCGGCGGCGGACGTCTACAGCGCCCGCTGCCCTTCCCGGGCCGCCCTCGCCCTCATCGCCGACAAATGGGCCGTGCTGGTCGCCGGGTGCCTGGTCGACGGGCCCAAGCGGCATTCGTGGCTGCGCCACCAGATCGGGGGCATCTCGGGCAAGATGCTCACCCGGACCCTGCGCGAGCTGGAGCGGGCCGGCCTGGTCGAGCGGCGCATCTTCCCCGAGGTGCCGACCCGGGTCGAGTACTCGCTGTCTCCCCTCGGCTCCAGCCTGCGCGAGCCGGTCGCGGCCATCACCGAGTGGGCCAAGGCCAACGGCGGCCCGGTGGTCGAGGCCCGCACCCGTAACGGGAGGCCGGTGGAGCGGGCCGGGTAG
PROTEIN sequence
Length: 134
MSHIPGQADQRSAADVYSARCPSRAALALIADKWAVLVAGCLVDGPKRHSWLRHQIGGISGKMLTRTLRELERAGLVERRIFPEVPTRVEYSLSPLGSSLREPVAAITEWAKANGGPVVEARTRNGRPVERAG*