ggKbase home page

PLM1_30_b1_sep16_scaffold_5400

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_5400_1
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

comp(1..282)
DNA (282bp) protein (94aa)
glycosyl transferase family 1 Tax=Salinispora pacifica RepID=UPI00036FD54B
glycosyltransferase
Tax=GWC2_SYX_53_9_curated
PLM1_30_b1_sep16_scaffold_5400_2
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(380..616)
DNA (237bp) protein (79aa)
DNA-binding protein Tax=Frankia sp. Iso899 RepID=UPI0003B728BC
DNA-binding protein {ECO:0000313|EMBL:ERI41475.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
excisionase family DNA binding domain-containing protein
PLM1_30_b1_sep16_scaffold_5400_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

894..1295
DNA (402bp) protein (134aa)
HxlR family transcriptional regulator Tax=Amycolatopsis nigrescens RepID=UPI000370D4AE
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ABW12288.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_30_b1_sep16_scaffold_5400_4
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(1320..1775)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5Y3_UNCMA
hypothetical protein
Tax=RBG_13_Chloroflexi_50_21_curated
PLM1_30_b1_sep16_scaffold_5400_5
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

1870..2946
DNA (1077bp) protein (359aa)
Chromosome partitioning protein Soj Tax=uncultured candidate division OP1 bacterium RepID=H5SSR7_9BACT
Chromosome partitioning protein Soj {ECO:0000313|EMBL:BAL59203.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
soj_1; ATPase involved in chromosome partitioning ParA family
PLM1_30_b1_sep16_scaffold_5400_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3013..3570
DNA (558bp) protein (186aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI000367298A
copper-binding protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM1_30_b1_sep16_scaffold_5400_7
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3576..4097)
DNA (522bp) protein (174aa)
Putative uncharacterized protein Tax=Gordonia araii NBRC 100433 RepID=G7H1T4_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB09809.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_5400_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4202..5389
DNA (1188bp) protein (396aa)
Two-component system histidine kinase Tax=Amycolatopsis mediterranei RepID=D8I8J9_AMYMU
Uncharacterized protein {ECO:0000313|EMBL:ETK35177.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
two-component system histidine kinase
PLM1_30_b1_sep16_scaffold_5400_9
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5386..5613
DNA (228bp) protein (76aa)
LuxR family transcriptional regulator Tax=Amycolatopsis alba RepID=UPI00036C5598
response regulator receiver protein
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFZ82590.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
Displaying 9 items

View Taxonomy