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PLM1_30_b1_sep16_scaffold_5988_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 990..1304

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 Tax=Frankia sp. BMG5.12 RepID=UPI00037F3A97 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 104.0
  • Bit_score: 169
  • Evalue 9.60e-40
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 166
  • Evalue 2.30e-39
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 166
  • Evalue 1.10e-38

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Taxonomy

Nocardia farcinica → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGTCGAGGGCGTCACCAACGGGTACGAGAAGCAGCTCGAGATCCAGGGGGTCGGCTACCGGGTCCAGGCCCAGGGCTCCGACCTGGTGTTCAGCCTCGGCTACTCCCACCAGATCCCGGTCAAGGCCCCCGAGGGCATCACCTTCGAGGTGACCAGCCCGACCCGGTTCTCGGTCAGGGGCATCGACAAGCAGCAGGTGGGCCAGGTGGCGGCCGACATCCGGCGGCTGCGCAAGCCAGACCCGTACAAGGGCAAGGGCGTGCGCTACGCCGGCGAGGTCGTCCGCCGCAAGGCCGGCAAGACGGCGAAGTGA
PROTEIN sequence
Length: 105
MVEGVTNGYEKQLEIQGVGYRVQAQGSDLVFSLGYSHQIPVKAPEGITFEVTSPTRFSVRGIDKQQVGQVAADIRRLRKPDPYKGKGVRYAGEVVRRKAGKTAK*