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PLM1_30_b1_sep16_scaffold_5988

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_5988_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2..289
DNA (288bp) protein (96aa)
50S ribosomal protein L5 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2Y4_ACIFD
50S ribosomal protein L5
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_5988_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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351..536
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWD1_PSEUX
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_30_b1_sep16_scaffold_5988_3
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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990..1304
DNA (315bp) protein (105aa)
50S ribosomal protein L6 Tax=Frankia sp. BMG5.12 RepID=UPI00037F3A97
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM1_30_b1_sep16_scaffold_5988_4
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1315..1668
DNA (354bp) protein (118aa)
50S ribosomal protein L18 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BER6_MYCCN
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_30_b1_sep16_scaffold_5988_5
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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1693..2337
DNA (645bp) protein (215aa)
30S ribosomal protein S5 Tax=Agromyces italicus RepID=UPI0003B3F6BF
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_30_b1_sep16_scaffold_5988_6
BJP_IG2158_Actinobacteria_57_21, Bacteria

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2334..2519
DNA (186bp) protein (62aa)
50S ribosomal protein L30 Tax=Ruania albidiflava RepID=UPI0003B4BD86
50S ribosomal protein L30
Tax=BJP_IG2158_Actinobacteria_57_21
PLM1_30_b1_sep16_scaffold_5988_7
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2516..2953
DNA (438bp) protein (146aa)
50S ribosomal protein L15 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P887_9ACTO
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
PLM1_30_b1_sep16_scaffold_5988_8
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2979..4265
DNA (1287bp) protein (429aa)
Protein translocase subunit SecY Tax=Frankia sp. EUN1f RepID=D3CUU5_9ACTO
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM1_30_b1_sep16_scaffold_5988_9
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4396..4800
DNA (405bp) protein (135aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Adenylate kinase Tax=Thermobifida fusca RepID=KAD_THEFY
PLM1_30_b1_sep16_scaffold_5988_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4797..5546
DNA (750bp) protein (250aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Methionine aminopeptidase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A356_THECD
PLM1_30_b1_sep16_scaffold_5988_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(5557..5751)
DNA (195bp) protein (65aa)
ribonuclease Tax=Serinicoccus marinus RepID=UPI0003B42ABF
Conserved protein of unknown function with PIN domain
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 11 items

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