ggKbase home page

PLM1_30_b1_sep16_scaffold_5988_5

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1693..2337

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 Tax=Agromyces italicus RepID=UPI0003B3F6BF similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 204.0
  • Bit_score: 266
  • Evalue 1.20e-68
30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 210.0
  • Bit_score: 266
  • Evalue 3.40e-69
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 210.0
  • Bit_score: 266
  • Evalue 1.70e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGCACCAGCCCCTCGCCGGGGTCCCGGTGGACAGCAGGGCAACCGGCCCCCCCGTGACGACCGGGGCGGCCCAGGCCGGGATGACGCCCCCAAGTCGCAGTTCGAAGAGCGCGTGGTCGCGATCAACCGCGTGGCCAAGGTGGTGAAGGGTGGCCGGAGGTTCTCCTTCACCGCCCTGGTGGTGGTCGGCGACGGCAACGGCAAGGTCGGCGTCGGCTACGGCAAGGCCAAGGAGGTCCCCTCGGCCATCCAGAAGGGCGTCGAGACGGCCAAGAAGAACTTCTTCGCCGTGCCGATGATCGGCTCGACCATCCCCCACGAGGTCCTGGGCGCCGAGGGCGCCGGCCGGGTGCTGCTCAAGCCGGCCTCCCCGGGTACCGGGGTCATCGCCGGCGGCCCGGTCCGGGCCGTGCTCGAGGCGGCCGGGGTCTCCGACGTGCTCTCCAAGTCGCTCGGGTCCTCCAACCCGATCAACATCGTCCACGCCACCGTCCAGGGCCTGAAGCAGCTCCGCCGGCCCCAGGAGGTGGCCGACGCGCGCGGCCTGGACCTGGCCGAGATGTCGCCGGTCACGGTGGCCAGGCAGAAGGCGGCGGCCGCGGTCGGCGCCGCCGCCGGCAAGGCGAAGGAGCAGTCGGCGTGA
PROTEIN sequence
Length: 215
MAPAPRRGPGGQQGNRPPRDDRGGPGRDDAPKSQFEERVVAINRVAKVVKGGRRFSFTALVVVGDGNGKVGVGYGKAKEVPSAIQKGVETAKKNFFAVPMIGSTIPHEVLGAEGAGRVLLKPASPGTGVIAGGPVRAVLEAAGVSDVLSKSLGSSNPINIVHATVQGLKQLRRPQEVADARGLDLAEMSPVTVARQKAAAAVGAAAGKAKEQSA*