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PLM1_5_b1_sep16_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_320_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..1431)
DNA (1431bp) protein (477aa)
Glycosyl transferase family 51 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3S4_CONWI
glycosyl transferase family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1428..2144)
DNA (717bp) protein (239aa)
MscS Mechanosensitive ion channel Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3S3_CONWI
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADB54298.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_320_3
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(2189..2578)
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJE4_9AQUI
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM1_5_b1_sep16_scaffold_320_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2605..3774
DNA (1170bp) protein (390aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3S2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54297.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_320_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3747..4481
DNA (735bp) protein (245aa)
hypothetical protein Tax=Nocardiopsis synnemataformans RepID=UPI00034A41B5
abortive infection domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4445..5803
DNA (1359bp) protein (453aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003825500
ErfK/YbiS/YcfS/YnhG family protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_5_b1_sep16_scaffold_320_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5853..6227
DNA (375bp) protein (125aa)
Putative uncharacterized protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RW3_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD39580.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM1_5_b1_sep16_scaffold_320_8
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

6224..6505
DNA (282bp) protein (94aa)
Prephenate dehydratase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGB9_DESAR
prephenate dehydratase
Tax=RBG_16_Acidobacteria_64_8_curated
PLM1_5_b1_sep16_scaffold_320_9

Not on your lists

comp(6670..7176)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3W6_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL18429.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_5_b1_sep16_scaffold_320_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7262..7657)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Geobacillus caldoxylosilyticus RepID=UPI00031DDC7B
cbs domain protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_trna_1
unknown

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7690..7763
DNA (74bp)
transferRNA Ile
PLM1_5_b1_sep16_scaffold_320_11
unknown

Not on your lists

comp(7877..8125)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_320_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8166..9011)
DNA (846bp) protein (282aa)
ParB-like partition protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3W7_CONWI
parB-like partition protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8995..9612)
DNA (618bp) protein (206aa)
PREDICTED: putative septum site-determining protein MinD-like Tax=Pantholops hodgsonii RepID=UPI0003C18CFF
parA; chromosome partitioning protein ParA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_14
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9626..10270)
DNA (645bp) protein (215aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
Ribosomal RNA small subunit methyltransferase G Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAH8_AMMDK
methyltransferase GidB
PLM1_5_b1_sep16_scaffold_320_15
Megasphaera micronuciformis, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10267..10941)
DNA (675bp) protein (225aa)
hypothetical protein Tax=Gracilibacillus lacisalsi RepID=UPI00035CAB93
Jag-like protein
R3H domain protein {ECO:0000313|EMBL:EFQ05030.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera micronuciformis F0359.;"
PLM1_5_b1_sep16_scaffold_320_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10941..11774)
DNA (834bp) protein (278aa)
Membrane protein insertase, YidC/Oxa1 family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3X2_CONWI
YidC/Oxa1 family membrane protein insertase
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:ADB54347.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_5_b1_sep16_scaffold_320_17
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11771..12001)
DNA (231bp) protein (77aa)
Putative membrane protein insertion efficiency factor Tax=Ruminococcus albus 8 RepID=E9S9T8_RUMAL
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
conserved hypothetical protein
PLM1_5_b1_sep16_scaffold_320_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11998..12348)
DNA (351bp) protein (117aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Ribonuclease P protein component Tax=Patulibacter medicamentivorans RepID=H0E9J6_9ACTN
ribonuclease P protein component
PLM1_5_b1_sep16_scaffold_320_19

Not on your lists


comp(12356..12619)
DNA (264bp) protein (88aa)
50S ribosomal protein L34 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NWD7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KGA16553.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
50S ribosomal protein L34
PLM1_5_b1_sep16_scaffold_320_20
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

12768..14126
DNA (1359bp) protein (453aa)
Chromosomal replication initiator protein DnaA Tax=Bhargavaea cecembensis DSE10 RepID=M7NV72_9BACL
dnaA; chromosomal replication initiator protein DnaA
Tax=GWC2_SYX_53_9_curated
PLM1_5_b1_sep16_scaffold_320_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14254..15384
DNA (1131bp) protein (377aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYQ5_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15469..16458
DNA (990bp) protein (330aa)
DNA replication and repair protein RecF Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYQ6_CONWI
DNA replication and repair protein RecF
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16455..16910
DNA (456bp) protein (152aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_320_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16954..19347
DNA (2394bp) protein (798aa)
DNA gyrase B subunit (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA gyrase subunit B Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYQ8_CONWI
PLM1_5_b1_sep16_scaffold_320_25
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


19340..21670
DNA (2331bp) protein (777aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
DNA gyrase subunit A Tax=Patulibacter medicamentivorans RepID=H0E9I9_9ACTN
gyrA: DNA gyrase, A subunit
PLM1_5_b1_sep16_scaffold_320_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

21803..22111
DNA (309bp) protein (103aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_5_b1_sep16_scaffold_320_27
RBG_16_OP11_Curtissbacteria_39_7_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(22062..22712)
DNA (651bp) protein (217aa)
Galactose-1-phosphate uridylyltransferase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2M8_PELTS
galactose-1-phosphate uridylyltransferase
Tax=RBG_16_OP11_Curtissbacteria_39_7_curated
PLM1_5_b1_sep16_scaffold_320_28
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

22772..23557
DNA (786bp) protein (262aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00036BAE6C
Tax=RBG_13_Chloroflexi_54_9_curated
PLM1_5_b1_sep16_scaffold_320_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23522..24787)
DNA (1266bp) protein (422aa)
Putative protease/transporter bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying items 1-30 of 31 in total

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