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PLM1_5_b1_sep16_scaffold_570

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_570_1
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..383
DNA (381bp) protein (127aa)
phospholipase Tax=Amycolatopsis balhimycina RepID=UPI00037C1663
phospholipase D/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ADU47012.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM1_5_b1_sep16_scaffold_570_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(380..1468)
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
histidine kinase Tax=Actinopolymorpha alba RepID=UPI0003695017
integral membrane sensor signal transduction histidine kinase
PLM1_5_b1_sep16_scaffold_570_3
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1461..2150)
DNA (690bp) protein (230aa)
transcriptional regulator Tax=Streptomyces canus RepID=UPI00036573A0
Two component transcriptional regulator {ECO:0000313|EMBL:EDY53742.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
response regulator receiver protein
PLM1_5_b1_sep16_scaffold_570_4
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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2552..3265
DNA (714bp) protein (238aa)
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDM1_CATAD
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 {ECO:0000313|EMBL:ACU74645.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_5_b1_sep16_scaffold_570_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3262..4524)
DNA (1263bp) protein (421aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0K1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82341.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM1_5_b1_sep16_scaffold_570_6
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4611..5270
DNA (660bp) protein (220aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000368F595
Transcriptional regulator {ECO:0000313|EMBL:KHD74025.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
two-component system response regulator
PLM1_5_b1_sep16_scaffold_570_7
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5267..6553
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003777E85
histidine kinase
PLM1_5_b1_sep16_scaffold_570_8
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

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comp(6577..7878)
DNA (1302bp) protein (434aa)
Amylo-alpha-16-glucosidase Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DML8_9BACL
amylo-alpha-16-glucosidase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
PLM1_5_b1_sep16_scaffold_570_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8188..9909)
DNA (1722bp) protein (574aa)
Secreted protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q010_CATAD
secreted protein
Secreted protein {ECO:0000313|EMBL:ACU75503.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_5_b1_sep16_scaffold_570_10
unknown

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comp(10326..10559)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_570_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10614..10763)
DNA (150bp) protein (50aa)
hypothetical protein Tax=Nocardiopsis kunsanensis RepID=UPI000345A0C6
F420-dependent oxidoreductase
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:EXG82235.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_5_b1_sep16_scaffold_570_12
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10884..13043)
DNA (2160bp) protein (720aa)
Peroxinectin {ECO:0000313|EMBL:CEL20263.1}; EC=1.11.1.7 {ECO:0000313|EMBL:CEL20263.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Peroxidase (EC:1.11.1.7)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000372D059
PLM1_5_b1_sep16_scaffold_570_trna_1
unknown

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comp(13306..13378)
DNA (73bp)
transferRNA Thr
PLM1_5_b1_sep16_scaffold_570_13
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(13463..14677)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MTE3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD77860.1}; species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
integrase family protein
PLM1_5_b1_sep16_scaffold_570_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15219..15605)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea RepID=A4FI38_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQD86193.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_5_b1_sep16_scaffold_570_15
unknown

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16764..17111
DNA (348bp) protein (116aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_570_16

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comp(17122..17457)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA14642.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 17 items

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