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PLM1_5_b1_sep16_scaffold_1166

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_1166_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1..1029
DNA (1029bp) protein (343aa)
Acetyl-CoA acetyltransferase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJX7_THEM7
beta-ketoadipyl CoA thiolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_2
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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1104..1547
DNA (444bp) protein (148aa)
Two component transcriptional regulator, LuxR family Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IXN1_DEIGD
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABF46003.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
PLM1_5_b1_sep16_scaffold_1166_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1544..2764
DNA (1221bp) protein (407aa)
Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEY0_THIDA
diguanylate phosphodiesterase
Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor {ECO:0000313|EMBL:AAZ97014.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
PLM1_5_b1_sep16_scaffold_1166_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2855..3940
DNA (1086bp) protein (362aa)
RNA polymerase sigma factor Tax=Patulibacter medicamentivorans RepID=H0EAQ9_9ACTN
ECF family RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_5
unknown

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comp(3916..4170)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_1166_6
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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4224..5696
DNA (1473bp) protein (491aa)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:EGK07271.1}; EC=1.2.1.8 {ECO:0000313|EMBL:EGK07271.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
betaine-aldehyde dehydrogenase Tax=Laceyella sacchari RepID=UPI0003B3AD2C
aldehyde dehydrogenase
PLM1_5_b1_sep16_scaffold_1166_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5778..6791
DNA (1014bp) protein (338aa)
allantoate amidohydrolase Tax=Desulfitobacterium hafniense RepID=UPI00036BBE5A
allantoate amidohydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6856..7962
DNA (1107bp) protein (369aa)
Nucleoside-binding protein Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH38_MOOTA
basic membrane lipoprotein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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8246..9442
DNA (1197bp) protein (399aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ22_CALAS
putative ABC transporter ATP-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9442..10518
DNA (1077bp) protein (359aa)
Putative ABC transporter permease protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ21_CALAS
ABC transporter permease
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10512..11474
DNA (963bp) protein (321aa)
Inner-membrane translocator Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IA61_9FIRM
inner-membrane translocator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11471..11881)
DNA (411bp) protein (137aa)
PF12903 family protein Tax=Actinomyces massiliensis F0489 RepID=J0NGW9_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_1166_13
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11884..12003)
DNA (120bp) protein (40aa)
Membrane protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3H8P4_PSEAC
Membrane protein {ECO:0000313|EMBL:EQM68041.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
protein of unknown function DUF989
Displaying 13 items

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