ggKbase home page

PLM1_5_b1_sep16_scaffold_1166_4

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 2855..3940

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Patulibacter medicamentivorans RepID=H0EAQ9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 342.0
  • Bit_score: 103
  • Evalue 3.80e-19
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 164.0
  • Bit_score: 95
  • Evalue 3.00e-17
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 165.0
  • Bit_score: 120
  • Evalue 4.30e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
GTGAGCACCGCCTACGCCCAAGCGCCTCCGCGGGACGCGACCGCTCTGCTGTACGAGCGGCACTCGTCGCGCATCTTCGGTTTCTGCCTGAGTCGCCTCGGCTCACGGGAGGACGCAGAGGACGCCATGCAGATGACGTTCCTCAATGCGCAGCGCGGGCTCGGACGCGGGGTCGTTCCCGAGTTCGAGCTGGCGTGGCTCTTCAAGATCGCCCAGAACGTCTGCCATAACCGGCACCAGTCGGCGAAGCGGCGCGGTTGCGTCGAGGCGCCGCACGACCTCGACTCGCTGCAGGACGTGATCGCATCACCAGAGCGTGGTGGTAGCGGTGTTTCGCTCGGCGAGTTGACGCAGGCGCTGGGCACGATTCCGGCGCGACAGCGCAAGGCTCTGCTGCTGCGGGAGTTCCAGGGGTATTCGTACGAGGAGATCGCGGCCGAGCTGGACGTCACTGTCGCCGCCGTCGAGACGCTGCTCTTTCGTGCGCGCCGCGCCATGGCGCAGCAGCTCGAGCAGACCGGCGCAACGCAGAGTCGTGGCCGAAGCGCAGTCGCGGTGGTCTTCGAGGTCTTCCAGTGGCTCTTCAAGGGCGGGGCCGCGCCGCTCAAGCTCGCGGCGGTCGCGGCCACCGTGGCCACGACGGCCTCGCTCGCTGTCGTTCCCGCCGTACGCGACGGCCGGCCTGCTGCTCCACCCGTGCAGAAGCTCCCGGTGCTCACTTCAGTCGTGCCGCAGCGCGGCCAGGAGCGGAGCCGGGTCGTTACCGAGATCCCTCGCCGCGCCACGTCACGGCCTCAGGTCGCCGGCAATGTCACGGCGACGCCCACGGTTCCGGCGACCGCGGCTGCTTCGATGCAGACGTCGCAGACTCCAACGTCGAAGCCGAACGCTCCGGCCGCCGACGCGAAGGCGCCGACCGTGAAGACGACCACCGCTCCGACGGCGGCCGCGCCGGCGCTGCCGGCGATCACTGTGCCCGAGGTGACGGTCCCTGCGGTGAGCCTGCCCGATGCCTGCCGGACGTGCAGCTGCCGACCGTGCAGTTGGCGAAGCTTCCCTGATCAGCTCGAGGGCGGGCGGATGTAG
PROTEIN sequence
Length: 362
VSTAYAQAPPRDATALLYERHSSRIFGFCLSRLGSREDAEDAMQMTFLNAQRGLGRGVVPEFELAWLFKIAQNVCHNRHQSAKRRGCVEAPHDLDSLQDVIASPERGGSGVSLGELTQALGTIPARQRKALLLREFQGYSYEEIAAELDVTVAAVETLLFRARRAMAQQLEQTGATQSRGRSAVAVVFEVFQWLFKGGAAPLKLAAVAATVATTASLAVVPAVRDGRPAAPPVQKLPVLTSVVPQRGQERSRVVTEIPRRATSRPQVAGNVTATPTVPATAAASMQTSQTPTSKPNAPAADAKAPTVKTTTAPTAAAPALPAITVPEVTVPAVSLPDACRTCSCRPCSWRSFPDQLEGGRM*