ggKbase home page

PLM1_5_b1_sep16_scaffold_5261

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_b1_sep16_scaffold_5261_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..336)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Agromyces subbeticus RepID=UPI0003B31C18
Major facilitator superfamily MFS_1
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_5261_2
unknown

Not on your lists

460..606
DNA (147bp) protein (49aa)

This feature has no annotations

PLM1_5_b1_sep16_scaffold_5261_3
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(661..1305)
DNA (645bp) protein (215aa)
Putative sigma factor SigB regulation protein rsbU Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6L7_9ACTO
Putative sigma factor SigB regulation protein rsbU {ECO:0000313|EMBL:EFL22548.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
Metal dependent phosphohydrolase
PLM1_5_b1_sep16_scaffold_5261_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1302..2123)
DNA (822bp) protein (274aa)
Peptidase families S8 and S53 subfamily (Fragment) Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6L8_9ACTO
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_5261_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2391..2969)
DNA (579bp) protein (193aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI0003799E9E
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM1_5_b1_sep16_scaffold_5261_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3105..3569)
DNA (465bp) protein (155aa)
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
RNA polymerase sigma factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_5_b1_sep16_scaffold_5261_7
Medicago truncatula, Medicago, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(3599..4345)
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Moniliophthora roreri (strain MCA 2997) RepID=V2X3F3_MONRO
Frigida-LIKE protein {ECO:0000313|EMBL:KEH36096.1}; Uncharacterized protein {ECO:0000313|EnsemblPlants:KEH36096}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago.;" source="Medicago truncatula (Barrel medic) (Medicago tribuloides).;"
TonB family protein
Displaying 7 items

View Taxonomy