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PLM1_30_coex_sep16_scaffold_5557

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_coex_sep16_scaffold_5557_1
unknown

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3..101
DNA (99bp) protein (33aa)

This feature has no annotations

PLM1_30_coex_sep16_scaffold_5557_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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98..1057
DNA (960bp) protein (320aa)
Signal recognition particle receptor FtsY Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E0_CONWI
signal recognition particle-docking protein FtsY
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_30_coex_sep16_scaffold_5557_3
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1484..1696
DNA (213bp) protein (71aa)
Oxidoreductase, short-chain dehydrogenase/reductase family protein Tax=Marinobacter sp. BSs20148 RepID=M1FKS6_9ALTE
oxidoreductase
Oxidoreductase, short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:AFP31543.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. BSs20148.;"
PLM1_30_coex_sep16_scaffold_5557_4
unknown

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1729..2040
DNA (312bp) protein (104aa)

This feature has no annotations

PLM1_30_coex_sep16_scaffold_5557_5
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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comp(2046..2252)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM25_NITGG
hypothetical protein
Tax=RBG_13_Euryarchaeota_31_8_curated
PLM1_30_coex_sep16_scaffold_5557_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2305..3636
DNA (1332bp) protein (444aa)
Signal recognition particle protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJE2_THEM7
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_30_coex_sep16_scaffold_5557_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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3640..3879
DNA (240bp) protein (80aa)
30S ribosomal protein S16 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D6_CONWI
30S ribosomal protein S16
Tax=CG_Solirubrobact_01
PLM1_30_coex_sep16_scaffold_5557_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3879..4109
DNA (231bp) protein (77aa)
UPF0109 protein DAMO_3086 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMN7_9BACT
RNA-binding protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM1_30_coex_sep16_scaffold_5557_9
Selenomonas noxia, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4106..4570
DNA (465bp) protein (155aa)
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia F0398.;"
rimM; 16S rRNA-processing protein RimM
PLM1_30_coex_sep16_scaffold_5557_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4590..5246
DNA (657bp) protein (219aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D3_CONWI
PLM1_30_coex_sep16_scaffold_5557_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5243..5848
DNA (606bp) protein (202aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I Tax=Thermincola potens (strain JR) RepID=D5X8L1_THEPJ
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_30_coex_sep16_scaffold_5557_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5882..6073
DNA (192bp) protein (64aa)
50S ribosomal protein L19 Tax=Lactobacillus shenzhenensis LY-73 RepID=U4TRF0_9LACO
rplS; 50S ribosomal protein L19
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_30_coex_sep16_scaffold_5557_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6052..6549
DNA (498bp) protein (166aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D0_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_30_coex_sep16_scaffold_5557_14
unknown

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6518..6664
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 14 items

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