ggKbase home page

PLM1_30_coex_sep16_scaffold_9670

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_coex_sep16_scaffold_9670_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3..332
DNA (330bp) protein (110aa)
Transcriptional regulator, CarD family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F138_CONWI
BadM/Rrf2 family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_30_coex_sep16_scaffold_9670_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

431..1234
DNA (804bp) protein (268aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_30_coex_sep16_scaffold_9670_3
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1242..1889
DNA (648bp) protein (216aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Tetrasphaera elongata Lp2 RepID=N0E6C3_9MICO
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PLM1_30_coex_sep16_scaffold_9670_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2009..2476
DNA (468bp) protein (156aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N7S7_SLAHD
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_30_coex_sep16_scaffold_9670_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2487..2912
DNA (426bp) protein (142aa)
Rhodanese-related sulfurtransferase Tax=Micromonospora lupini str. Lupac 08 RepID=I0LAN3_9ACTO
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CCH20880.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
rhodanese domain-containing protein
PLM1_30_coex_sep16_scaffold_9670_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2859..3575)
DNA (717bp) protein (239aa)
HhH-GPD family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAY2_CONWI
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ADB51295.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_30_coex_sep16_scaffold_9670_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3568..4623)
DNA (1056bp) protein (352aa)
Na+/H+ antiporter Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC95_CONWI
Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:ADB53390.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_30_coex_sep16_scaffold_9670_8
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

5041..5361
DNA (321bp) protein (107aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZY2_ANATU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ62317.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM1_30_coex_sep16_scaffold_9670_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5394..6440
DNA (1047bp) protein (349aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000375F282
Glutamyl- and glutaminyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_30_coex_sep16_scaffold_9670_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6346..7329)
DNA (984bp) protein (328aa)
Transcriptional regulator, LysR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUB8_RUBXD
Transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM1_30_coex_sep16_scaffold_9670_11
unknown

Not on your lists

comp(7391..8071)
DNA (681bp) protein (227aa)

This feature has no annotations

PLM1_30_coex_sep16_scaffold_9670_12
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8146..8646
DNA (501bp) protein (167aa)
malate synthase A (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Malate synthase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SML9_THEM7
Displaying 12 items

View Taxonomy