ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_1489

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_5_coex_redo_sep16_scaffold_1489_1
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20..1018)
DNA (999bp) protein (333aa)
Methyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XKV4_9BACT bin=RBG9 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG9 organism_group=Chloroflexi
Uncharacterized protein {ECO:0000313|EMBL:AKB77399.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_1489_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1504..2019
DNA (516bp) protein (172aa)
hypothetical protein Tax=Rhodococcus opacus RepID=UPI00029CCD13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK35129.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM1_5_coex_redo_sep16_scaffold_1489_3
unknown

Not on your lists

comp(2244..2375)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_1489_4
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2329..3420)
DNA (1092bp) protein (364aa)
Monooxygenase FAD-binding Tax=Streptomyces griseus RepID=G0Q0E3_STRGR
monooxygenase
Putative monooxygenase {ECO:0000313|EMBL:BAG19860.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350).;"
PLM1_5_coex_redo_sep16_scaffold_1489_5
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3783..4463)
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VR92_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJF23540.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
hypothetical protein
PLM1_5_coex_redo_sep16_scaffold_1489_6
unknown

Not on your lists

4488..5003
DNA (516bp) protein (172aa)

This feature has no annotations

PLM1_5_coex_redo_sep16_scaffold_1489_7
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4867..5172)
DNA (306bp) protein (102aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036B7A94
Putative LuxR family transcriptional regulator {ECO:0000313|EMBL:GAB91942.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
LuxR family transcriptional regulator
PLM1_5_coex_redo_sep16_scaffold_1489_8
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5298..6041)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036B7A94
LuxR family transcriptional regulator
Possible transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:ABG94580.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
PLM1_5_coex_redo_sep16_scaffold_1489_9
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6154..6684
DNA (531bp) protein (177aa)
cupin Tax=Frankia sp. Iso899 RepID=UPI0003B64BBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG92617.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
PLM1_5_coex_redo_sep16_scaffold_1489_10
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7566..7727)
DNA (162bp) protein (54aa)
UPI0003D6D30B related cluster Tax=unknown RepID=UPI0003D6D30B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHD24062.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
PLM1_5_coex_redo_sep16_scaffold_1489_11
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7757..8149)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000360D0D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHD24062.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
PLM1_5_coex_redo_sep16_scaffold_1489_12
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8373..9149
DNA (777bp) protein (259aa)
hypothetical protein Tax=Kocuria sp. UCD-OTCP RepID=UPI00037EF904
Uncharacterized protein {ECO:0000313|EMBL:KHD99097.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
PLM1_5_coex_redo_sep16_scaffold_1489_13
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9241..9489)
DNA (249bp) protein (83aa)
Ion transport 2 domain protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYQ2_BEUC1
Ion transport 2 domain-containing protein
Ion transport 2 domain protein {ECO:0000313|EMBL:ACQ79010.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 13 items

View Taxonomy