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PLM2_5_b1_sep16_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 233 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_4_1
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

392..2371
DNA (1980bp) protein (660aa)
tolB; peptidase S9 prolyl oligopeptidase active site domain protein (EC:3.4.19.1)
Peptidase S9, prolyl oligopeptidase active site region Tax=Luminiphilus syltensis NOR5-1B RepID=B8KVS6_9GAMM
Peptidase S9, prolyl oligopeptidase active site region {ECO:0000313|EMBL:EED35317.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
PLM2_5_b1_sep16_scaffold_4_2
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2368..3012)
DNA (645bp) protein (215aa)
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM2_5_b1_sep16_scaffold_4_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3069..4541)
DNA (1473bp) protein (491aa)
Putative outer membrane efflux protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU1_GEMAT
putative outer membrane efflux protein
Putative outer membrane efflux protein {ECO:0000313|EMBL:BAH40668.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_4_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4546..5931)
DNA (1386bp) protein (462aa)
Hypothetical membrane protein bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40669.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_4_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5928..7310)
DNA (1383bp) protein (461aa)
Secretion protein HlyD family protein bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAH40670.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_4_6
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7409..7984)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Pontibacter sp. BAB1700 RepID=J0V5T5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF09442.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_4_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8011..8841)
DNA (831bp) protein (277aa)
hypothetical protein bin=CD_OP8_4m species=Gracilimonas tropica genus=Gracilimonas taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
lipoprotein NlpI, contains TPR repeats
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM2_5_b1_sep16_scaffold_4_8
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8853..10352)
DNA (1500bp) protein (500aa)
Glycosidase related protein Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PQH8_MURRD
glycosidase-like protein
Glycosidase related protein {ECO:0000313|EMBL:AEM70573.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
PLM2_5_b1_sep16_scaffold_4_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10349..11194)
DNA (846bp) protein (282aa)
CAAX amino terminal protease Tax=Streptomyces sp. ATexAB-D23 RepID=UPI00037F2E46
abortive infection protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM2_5_b1_sep16_scaffold_4_10
unknown

Not on your lists

comp(11216..11815)
DNA (600bp) protein (200aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_11
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(11960..13366)
DNA (1407bp) protein (469aa)
Beta-lactamase bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
penicillin-binding protein
Tax=RBG_13_Aminicenantes_62_12_curated
PLM2_5_b1_sep16_scaffold_4_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13339..14061)
DNA (723bp) protein (241aa)
Lipolytic protein G-D-S-L family Tax=Rhodopirellula maiorica SM1 RepID=M5S2G7_9PLAN
lipolytic protein G-D-S-L family
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AHG88259.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_4_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14064..15659)
DNA (1596bp) protein (532aa)
Amidase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCB1_MYXSD
amidase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4_14
unknown

Not on your lists

comp(15714..15995)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_15
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16030..18366)
DNA (2337bp) protein (779aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003651DAB
Penicillin-binding protein {ECO:0000313|EMBL:KJV35805.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
penicillin-binding protein
PLM2_5_b1_sep16_scaffold_4_16
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18363..24218)
DNA (5856bp) protein (1952aa)
Alpha-2-macroglobulin domain protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CR28_SIDLE
alpha-2-macroglobulin domain protein
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:ADE11414.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
PLM2_5_b1_sep16_scaffold_4_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24314..25867
DNA (1554bp) protein (518aa)
Peptidase M14 carboxypeptidase A Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEX0_RHOMR
peptidase M14 carboxypeptidase A
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_4_18
unknown

Not on your lists

comp(25884..26417)
DNA (534bp) protein (178aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26410..26883)
DNA (474bp) protein (158aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X82_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88262.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_4_20
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26871..27257)
DNA (387bp) protein (129aa)
hypothetical protein Tax=Curtobacterium flaccumfaciens RepID=UPI0003758DE2
Epimerase {ECO:0000313|EMBL:EYT62870.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_4_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27254..28222)
DNA (969bp) protein (323aa)
D-alanyl-D-alanine dipeptidase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE43_SINAD
D-alanyl-D-alanine dipeptidase
D-alanyl-D-alanine dipeptidase {ECO:0000313|EMBL:AGA27135.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM2_5_b1_sep16_scaffold_4_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28227..28988)
DNA (762bp) protein (254aa)
Esterase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIM0_RHOMR
esterase
Esterase {ECO:0000313|EMBL:AEN72353.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM2_5_b1_sep16_scaffold_4_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29008..30369)
DNA (1362bp) protein (454aa)
Amino acid permease-associated region Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WU2_SOLUE
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:AHG93554.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_4_24
unknown

Not on your lists

comp(30389..30667)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_25
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(30676..31224)
DNA (549bp) protein (183aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0003823905
GCN5-related N-acetyltransferase
Tax=RBG_13_Chloroflexi_68_17_curated
PLM2_5_b1_sep16_scaffold_4_26
unknown

Not on your lists

comp(31285..31539)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_27
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(31536..31874)
DNA (339bp) protein (113aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003745D2D
hypothetical protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EFH80331.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM2_5_b1_sep16_scaffold_4_28
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31887..32666)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Clostridium tyrobutyricum RepID=UPI00030A5CBE
putative ATPase
Putative ATPase {ECO:0000313|EMBL:CQR58134.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
PLM2_5_b1_sep16_scaffold_4_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(32663..33853)
DNA (1191bp) protein (397aa)
Putative beta-lactamase Tax=Variovorax paradoxus B4 RepID=T1XLW3_VARPD
putative beta-lactamase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_4_30
unknown

Not on your lists

comp(33870..34304)
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying items 1-30 of 233 in total

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