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PLM2_5_b1_sep16_scaffold_7005

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_7005_1
unknown

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comp(3..71)
DNA (69bp) protein (23aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_7005_2
RLO_PLX_64_10, Bacteria

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comp(523..972)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4E6FF
Modular FeS cluster scaffolding protein NifU
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM2_5_b1_sep16_scaffold_7005_3
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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comp(974..1783)
DNA (810bp) protein (270aa)
hypothetical protein FbacHQ_08004 bin=GWC1_OD1_38_17 species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Tax=RBG_16_Planctomycetes_43_13_curated
PLM2_5_b1_sep16_scaffold_7005_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1802..3043)
DNA (1242bp) protein (414aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PLM2_5_b1_sep16_scaffold_7005_5

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comp(3047..4102)
DNA (1056bp) protein (352aa)
Iron-regulated ABC transporter permease protein SufD Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB66_NITMU
FeS assembly protein SufD {ECO:0000313|EMBL:AIA11230.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FeS assembly protein SufD
PLM2_5_b1_sep16_scaffold_7005_6

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comp(4180..6291)
DNA (2112bp) protein (704aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:AIA16368.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
PLM2_5_b1_sep16_scaffold_7005_7

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comp(6301..7059)
DNA (759bp) protein (253aa)
FeS assembly ATPase SufC Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLD6_CHLTF
FeS assembly ATPase SufC {ECO:0000313|EMBL:AIA16367.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FeS assembly ATPase SufC
PLM2_5_b1_sep16_scaffold_7005_8
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

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comp(7063..7812)
DNA (750bp) protein (250aa)
(Beta)-carbonic anhydrase Tax=unidentified eubacterium SCB49 RepID=A6EQA2_9BACT
(Beta)-carbonic anhydrase {ECO:0000313|EMBL:EDM44371.1}; species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
carbonic anhydrase
PLM2_5_b1_sep16_scaffold_7005_9

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comp(7824..8333)
DNA (510bp) protein (170aa)
Histone acetyltransferase HPA2 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N771_MICTS
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AIA15845.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
histone acetyltransferase HPA2
PLM2_5_b1_sep16_scaffold_7005_10

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comp(8330..9145)
DNA (816bp) protein (272aa)
Phenazine biosynthesis-like protein {ECO:0000313|EMBL:AIA11222.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PhzF family phenazine biosynthesis protein; K06998 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
PLM2_5_b1_sep16_scaffold_7005_11

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comp(9153..10151)
DNA (999bp) protein (333aa)
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:AIA16519.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine phosphatase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
serine phosphatase
PLM2_5_b1_sep16_scaffold_7005_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10217..10699)
DNA (483bp) protein (161aa)
UPI0003CFB2C7 related cluster Tax=unknown RepID=UPI0003CFB2C7
Truncated hemoglobin {ECO:0000313|EMBL:CDM64853.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hemin transporter
PLM2_5_b1_sep16_scaffold_7005_13

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comp(10749..12188)
DNA (1440bp) protein (480aa)
Iron-regulated ABC transporter membrane component SufB Tax=Synechococcus elongatus RepID=Q31MF4_SYNE7
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIA17014.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cysteine desulfurase activator complex subunit SufB
Displaying 13 items

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