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PLM2_5_b1_sep16_scaffold_8275

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_8275_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1..1938)
DNA (1938bp) protein (646aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methionyl-tRNA synthetase/methionyl-tRNA synthetase subunit beta (EC:6.1.1.10)
Methionine--tRNA ligase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS8_CHLTF
PLM2_5_b1_sep16_scaffold_8275_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2483..3064)
DNA (582bp) protein (194aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
GTP cyclohydrolase 1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QR8_SYMTH
GTP cyclohydrolase
PLM2_5_b1_sep16_scaffold_8275_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3201..5219
DNA (2019bp) protein (673aa)
Arginyl-tRNA synthetase {ECO:0000313|EMBL:CDM65299.1}; EC=6.1.1.19 {ECO:0000313|EMBL:CDM65299.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginyl-tRNA synthetase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHQ5_CHLTF
PLM2_5_b1_sep16_scaffold_8275_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5341..5814
DNA (474bp) protein (158aa)
Membrane protein-like protein Tax=Pedosphaera parvula Ellin514 RepID=B9XD77_9BACT
Membrane protein-like protein {ECO:0000313|EMBL:EEF62023.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_8275_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5845..6894
DNA (1050bp) protein (350aa)
aroF2; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ACO32611.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ACO32611.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
3-deoxy-7-phosphoheptulonate synthase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F361_ACIC5
PLM2_5_b1_sep16_scaffold_8275_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7335..7760)
DNA (426bp) protein (142aa)
XRE family transcriptional regulator Tax=Serratia marcescens RepID=L7ZNW1_SERMA
Predicted transcription factor, MBF1 like protein {ECO:0000313|EMBL:CDM66651.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transcriptional regulator, XRE family with cupin sensor
PLM2_5_b1_sep16_scaffold_8275_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8036..8740
DNA (705bp) protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66649.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
single-stranded DNA-binding protein
PLM2_5_b1_sep16_scaffold_8275_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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8930..9355
DNA (426bp) protein (142aa)
glyoxalase Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248411F
Glyoxalase/bleomycin resistance protein/dioxygenase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM2_5_b1_sep16_scaffold_8275_9
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9371..9766
DNA (396bp) protein (132aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KM76_SHEWM
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACA84489.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
PLM2_5_b1_sep16_scaffold_8275_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9790..11517)
DNA (1728bp) protein (576aa)
Peptidase M16 domain protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSJ2_CHLT3
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66641.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16 domain-containing protein
PLM2_5_b1_sep16_scaffold_8275_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11532..12809)
DNA (1278bp) protein (426aa)
Peptidase M16 domain protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QYA3_CHLT3
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16 domain-containing protein
PLM2_5_b1_sep16_scaffold_8275_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13127..14767
DNA (1641bp) protein (547aa)
C-terminal processing peptidase {ECO:0000313|EMBL:CDM66645.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDM66645.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal peptidase (Prc) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH65_CHLTF
Displaying 12 items

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