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PLM2_5_b1_sep16_scaffold_2884

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2884_1
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3..368)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UC98_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN12855.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
PLM2_5_b1_sep16_scaffold_2884_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(520..2862)
DNA (2343bp) protein (781aa)
Multicopper oxidase type 2 Tax=Geobacter metallireducens RCH3 RepID=H1LBH5_GEOME
ompB; laccase family multicopper oxidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM2_5_b1_sep16_scaffold_2884_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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3175..4725
DNA (1551bp) protein (517aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376EF43
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM2_5_b1_sep16_scaffold_2884_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5249..7135)
DNA (1887bp) protein (629aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000376198B
DNA-binding protein with winged-HTH domain {ECO:0000313|EMBL:CDM65265.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
serine/threonine protein kinase
PLM2_5_b1_sep16_scaffold_2884_5
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

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7333..10929
DNA (3597bp) protein (1199aa)
Cna B domain protein Tax=Microcoleus vaginatus FGP-2 RepID=F5UHL3_9CYAN
Calx-beta domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
PLM2_5_b1_sep16_scaffold_2884_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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11563..12009
DNA (447bp) protein (149aa)
Dihydrofolate reductase Tax=mine drainage metagenome RepID=T1B596_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM2_5_b1_sep16_scaffold_2884_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12052..13485)
DNA (1434bp) protein (478aa)
Amino acid permease-associated region Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025N4_SOLUE
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:AHG88670.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_2884_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13628..14479
DNA (852bp) protein (284aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PLM2_5_b1_sep16_scaffold_2884_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14476..15195
DNA (720bp) protein (240aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH Tax=Proteobacteria bacterium CAG:139 RepID=R5ZZ77_9PROT
PLM2_5_b1_sep16_scaffold_2884_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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15200..15955
DNA (756bp) protein (252aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CDM66882.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDM66882.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDC2_CHLTF
PLM2_5_b1_sep16_scaffold_2884_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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15969..16715
DNA (747bp) protein (249aa)
Rhomboid family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XEX2_9BACT
Rhomboid family protein {ECO:0000313|EMBL:EEF61470.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rhomboid family protein
PLM2_5_b1_sep16_scaffold_2884_12
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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16719..17351
DNA (633bp) protein (211aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000255|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01057}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
tRNA (guanine-N(7)-)-methyltransferase Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=TRMB_ANAVT
PLM2_5_b1_sep16_scaffold_2884_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(17356..17844)
DNA (489bp) protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptide deformylase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=DEF_ACIC5
peptide deformylase
Displaying 13 items

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