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PLM2_5_b1_sep16_scaffold_1026

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1026_1
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..399)
DNA (399bp) protein (133aa)
AraC family transcriptional regulator Tax=Rhodococcus rhodochrous RepID=UPI00035D997C
Transcriptional regulator, AraC family (Modular protein) {ECO:0000313|EMBL:CDZ88323.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
AraC family transcriptional regulator
PLM2_5_b1_sep16_scaffold_1026_2
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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487..1053
DNA (567bp) protein (189aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000365271E
Uncharacterized protein {ECO:0000313|EMBL:KJK12931.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
deaminase-reductase domain-containing protein
PLM2_5_b1_sep16_scaffold_1026_3
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1162..2661
DNA (1500bp) protein (500aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000362B09D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL86720.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM2_5_b1_sep16_scaffold_1026_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2665..4305
DNA (1641bp) protein (547aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037BB658
UMUC domain-containing protein DNA-repair protein
UMUC domain protein DNA-repair protein {ECO:0000313|EMBL:ADP80396.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM2_5_b1_sep16_scaffold_1026_5
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4327..4923)
DNA (597bp) protein (199aa)
hypothetical protein Tax=Longispora albida RepID=UPI000365DFFC
TetR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EEP74505.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM2_5_b1_sep16_scaffold_1026_6
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4937..6523)
DNA (1587bp) protein (529aa)
hypothetical protein Tax=Longispora albida RepID=UPI000373B855
Mem2
Mem2 {ECO:0000313|EMBL:AGL18039.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM2_5_b1_sep16_scaffold_1026_7
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6726..7433
DNA (708bp) protein (236aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000377AFDA
hydrolase
Hydrolase {ECO:0000313|EMBL:AEV84252.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM2_5_b1_sep16_scaffold_1026_8
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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7448..8632
DNA (1185bp) protein (395aa)
Amidohydrolase Tax=Modestobacter marinus (strain BC501) RepID=I4EVQ5_MODMB
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CCH87468.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_1026_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8629..9897)
DNA (1269bp) protein (423aa)
Major facilitator superfamily permease Tax=Streptomyces griseoaurantiacus M045 RepID=F3NRY0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI02140.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM2_5_b1_sep16_scaffold_1026_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9890..10432)
DNA (543bp) protein (181aa)
Transcriptional regulator, MarR family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q3S6_KRIFD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB35948.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM2_5_b1_sep16_scaffold_1026_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10517..13864
DNA (3348bp) protein (1116aa)
dnaE2; error-prone DNA polymerase (EC:2.7.7.7)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Error-prone DNA polymerase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L8X4_9ACTO
PLM2_5_b1_sep16_scaffold_1026_12
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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14058..15071
DNA (1014bp) protein (338aa)
DNA repair photolyase Tax=Frankia sp. QA3 RepID=I9KBD4_9ACTO
DNA repair photolyase {ECO:0000313|EMBL:EIV91283.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1026_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(15121..15453)
DNA (333bp) protein (111aa)
RNA methyltransferase Tax=Frankia sp. Iso899 RepID=UPI0003B3375A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78750.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM2_5_b1_sep16_scaffold_1026_14
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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15536..16297
DNA (762bp) protein (254aa)
ArsR family transcriptional regulator Tax=Mycobacterium abscessus RepID=I0PE51_MYCAB
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDR17383.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
ArsR family transcriptional regulator
PLM2_5_b1_sep16_scaffold_1026_15
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16809..17045
DNA (237bp) protein (79aa)
Putative uncharacterized protein Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPT6_CAUST
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM2_5_b1_sep16_scaffold_1026_16
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(17075..17686)
DNA (612bp) protein (204aa)
Two component transcriptional regulator, LuxR family Tax=Frankia sp. (strain EAN1pec) RepID=A8LEC1_FRASN
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABW12593.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying 16 items

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