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PLM2_5_b1_sep16_scaffold_1082

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1082_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..1389
DNA (1389bp) protein (463aa)
AAA ATPase central domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV81_PSEUX
ATPase AAA
AAA ATPase central domain protein {ECO:0000313|EMBL:AEA28627.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM2_5_b1_sep16_scaffold_1082_2
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1399..1647
DNA (249bp) protein (83aa)
hypothetical protein Tax=Streptomyces sp. AA0539 RepID=UPI0003638F15
ATP/GTP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EPD94420.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
PLM2_5_b1_sep16_scaffold_1082_3
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

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1680..2423
DNA (744bp) protein (248aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003673FC9
Short-chain dehydrogenase {ECO:0000313|EMBL:KGI81626.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
putative oxidoreductase
PLM2_5_b1_sep16_scaffold_1082_4
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2447..3406
DNA (960bp) protein (320aa)
Oxidoreductase Tax=Micromonospora lupini str. Lupac 08 RepID=I0LC38_9ACTO
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63005.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
aldo/keto reductase
PLM2_5_b1_sep16_scaffold_1082_5
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3407..4405)
DNA (999bp) protein (333aa)
cellulose-binding protein Tax=Streptomyces scabrisporus RepID=UPI00036CA71E
Cellulose-binding protein
Cellulose-binding protein {ECO:0000313|EMBL:AEW96573.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM2_5_b1_sep16_scaffold_1082_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4434..5813)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ADZ8_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY99424.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM2_5_b1_sep16_scaffold_1082_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(5924..6967)
DNA (1044bp) protein (348aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI0003746DCF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG04730.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_1082_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6997..7488)
DNA (492bp) protein (164aa)
mceE; methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SME3_ACTS5
Glyoxalase {ECO:0000313|EMBL:KHD77141.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM2_5_b1_sep16_scaffold_1082_9
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7508..8686
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGP54957.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AGP54957.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
acetyl-CoA acetyltransferase Tax=Streptomyces rapamycinicus RepID=UPI000383179C
PLM2_5_b1_sep16_scaffold_1082_10
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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8701..9675
DNA (975bp) protein (325aa)
Lysine arginine ornithine transport system kinase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RXB5_BLASD
Lysine arginine ornithine transport system kinase
Lysine arginine ornithine transport system kinase {ECO:0000313|EMBL:CCG04726.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_1082_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9755..10645)
DNA (891bp) protein (297aa)
Putative hydroxylase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6R2_9ACTO
Putative hydroxylase {ECO:0000313|EMBL:CCH19509.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
NAD-dependent epimerase/dehydratase
PLM2_5_b1_sep16_scaffold_1082_12
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10656..10919)
DNA (264bp) protein (88aa)
Transcriptional regulator, XRE family Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PW81_STANL
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADD41238.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM2_5_b1_sep16_scaffold_1082_13
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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10976..11752
DNA (777bp) protein (259aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000349905F
map; methionyl aminopeptidase
PLM2_5_b1_sep16_scaffold_1082_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11817..13763)
DNA (1947bp) protein (649aa)
Chitinase {ECO:0000313|EMBL:CEL22702.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CEL22702.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
glycoside hydrolase Tax=Nocardiopsis sp. CNS639 RepID=UPI00037B7828
glycoside hydrolase family protein
PLM2_5_b1_sep16_scaffold_1082_15
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13876..14406
DNA (531bp) protein (177aa)
Transcriptional regulator, MarR-family Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RXB0_BLASD
marR family transcriptional regulator
Transcriptional regulator, MarR-family {ECO:0000313|EMBL:CCG04721.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_1082_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14474..16135
DNA (1662bp) protein (554aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AS15_STRRD
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ETK33892.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM2_5_b1_sep16_scaffold_1082_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16171..17190
DNA (1020bp) protein (340aa)
Thioredoxin domain protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEN4_GEOOG
Thioredoxin domain-containing protein
Thioredoxin domain protein {ECO:0000313|EMBL:ADB76670.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Displaying 17 items

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