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PLM2_5_b1_sep16_scaffold_1573

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1573_1
unknown

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1..1434
DNA (1434bp) protein (478aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1573_2
unknown

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1517..1735
DNA (219bp) protein (73aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1573_3
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1790..2869)
DNA (1080bp) protein (360aa)
Inositol 1-phosphate synthase Tax=Frankia sp. EUN1f RepID=D3D5W9_9ACTO
Inositol-3-phosphate synthase {ECO:0000313|EMBL:KEP23951.1}; species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
1L-myo-inositol-1-phosphate synthase
PLM2_5_b1_sep16_scaffold_1573_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2866..3429)
DNA (564bp) protein (188aa)
Transcriptional regulator protein-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BEE5_STRRD
transcriptional regulator
Transcriptional regulator protein-like protein {ECO:0000313|EMBL:ACZ91982.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM2_5_b1_sep16_scaffold_1573_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3605..4015
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HJY0_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWM14930.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM2_5_b1_sep16_scaffold_1573_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4125..6950
DNA (2826bp) protein (942aa)
peptidoglycan glycosyltransferase (Penicillin-binding protein) (EC:2.4.1.129)
Peptidoglycan glycosyltransferase (Penicillin-binding protein) {ECO:0000313|EMBL:CCH90939.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CCH90939.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Peptidoglycan glycosyltransferase (Penicillin-binding protein) Tax=Modestobacter marinus (strain BC501) RepID=I4F5M6_MODMB
PLM2_5_b1_sep16_scaffold_1573_7
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7261..7638)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KID28607.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
PLM2_5_b1_sep16_scaffold_1573_8
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7651..8118)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KID28608.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
PLM2_5_b1_sep16_scaffold_1573_9
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8182..9645)
DNA (1464bp) protein (488aa)
Putative integral membrane protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXT9_PSEUX
Membrane protein {ECO:0000313|EMBL:KEI46006.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
integral membrane protein
PLM2_5_b1_sep16_scaffold_1573_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9749..10519)
DNA (771bp) protein (257aa)
endonuclease IV (EC:3.1.21.2)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003679FA5
Endonuclease IV {ECO:0000313|EMBL:EEP72519.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM2_5_b1_sep16_scaffold_1573_11
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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10816..11106
DNA (291bp) protein (97aa)
30S ribosomal protein S6 Tax=Micromonospora sp. ATCC 39149 RepID=C4RHJ0_9ACTO
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
ribosomal protein s6
PLM2_5_b1_sep16_scaffold_1573_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11141..11692
DNA (552bp) protein (184aa)
single-stranded DNA-binding protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECF1
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM2_5_b1_sep16_scaffold_1573_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11728..11964
DNA (237bp) protein (79aa)
30S ribosomal protein S18 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S813_GEOOG
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM2_5_b1_sep16_scaffold_1573_14
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11976..12422
DNA (447bp) protein (149aa)
50S ribosomal protein L9 Tax=Actinoplanes globisporus RepID=UPI0003776826
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM2_5_b1_sep16_scaffold_1573_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12474..12827)
DNA (354bp) protein (118aa)
Rieske (2Fe-2S) iron-sulfur domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUQ7_PSEUX
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEA26371.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM2_5_b1_sep16_scaffold_1573_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12805..13800)
DNA (996bp) protein (332aa)
Rieske (2Fe-2S) iron-sulfur domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUQ6_PSEUX
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEA26370.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM2_5_b1_sep16_scaffold_1573_17
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(13847..14740)
DNA (894bp) protein (298aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Frankia sp. (strain EuI1c) RepID=E3JBQ7_FRASU
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADP81077.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM2_5_b1_sep16_scaffold_1573_18
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14737..15009)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Streptomyces gancidicus BKS 13-15 RepID=M3BY14_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EMF28959.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
NmrA family protein
Displaying 18 items

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