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PLM2_5_b1_sep16_scaffold_16559

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_16559_1
unknown

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comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_16559_2
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(274..387)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Nocardioidaceae RepID=D2PU56_KRIFD
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM2_5_b1_sep16_scaffold_16559_3
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(418..639)
DNA (222bp) protein (74aa)
translation initiation factor IF-1 Tax=Longispora albida RepID=UPI00036D9C49
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM2_5_b1_sep16_scaffold_16559_4
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(786..1262)
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJD5_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG01048.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_16559_5
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1259..2068)
DNA (810bp) protein (270aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
Methionine aminopeptidase Tax=Modestobacter marinus (strain BC501) RepID=I4F3R5_MODMB
PLM2_5_b1_sep16_scaffold_16559_6
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2137..2790)
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
Adenylate kinase Tax=Frankia sp. EUN1f RepID=D3CUU6_9ACTO
adenylate kinase
PLM2_5_b1_sep16_scaffold_16559_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2790..4106)
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH83_GEOOG
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM2_5_b1_sep16_scaffold_16559_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4234..4680)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FCB8_VERMA
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM2_5_b1_sep16_scaffold_16559_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4682..4864)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 Tax=Streptomyces scabrisporus RepID=UPI00037BCF2B
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
50S ribosomal protein L30
PLM2_5_b1_sep16_scaffold_16559_10
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4866..5471)
DNA (606bp) protein (202aa)
30S ribosomal protein S5 Tax=Streptomyces scabrisporus RepID=UPI00037E0B51
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM2_5_b1_sep16_scaffold_16559_11
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5554..5787)
DNA (234bp) protein (78aa)
50S ribosomal protein L18 Tax=Sporichthya polymorpha RepID=UPI0003651F8C
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Displaying 11 items

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