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PLM2_5_b1_sep16_scaffold_9053_2

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(296..1120)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase substrate binding domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0W0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 270.0
  • Bit_score: 292
  • Evalue 2.60e-76
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EXG81321.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 268.0
  • Bit_score: 300
  • Evalue 1.70e-78
shikimate dehydrogenase substrate binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 270.0
  • Bit_score: 292
  • Evalue 7.30e-77

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 825
GTGCGCGCCGCCGTGCTCGGCCGGCCGGTCGGCCACTCGCTGTCCCCGGTGCTGCACACCGCGGCGTACGCGGCGCTCGGGCTGCCGGACTGGTCGTACACGGCCGTCGACTGCGGCGAGCAGGAGCTGCCGGGCCTGCTGGCCGGGCTCGGGCCGGAGTGGGCCGGGCTGTCGCTGACCATGCCGCTCAAGCGGGCCGCGCTCGCGGTCGCGGACTCCGTCGACCCGCTGGCGGCGGCGGTCGGGTCGGCGAACACGCTGCTGCTCGGCGGCGGCCGGCGGGCGTACACGACCGACGTGGCCGGGATCGCCGAGGCACTGCGCGAGGCCGGCCTCACCGCGCCGCGGTCCGCGGTCGTGCTCGGCGCCGGCGGCACCGCCCAGGCCGCGCTGGCCGCCCTGGCCGGGCTCGGGCTGGACGCGGCGGTGGTGCTGGTGCGGGACCCGGCCCGGGCCGGGCAGCTGCGGGCCACCGCCGACCGGATCGGCATCGCGCTCGACCTGCGTGCCGGGCTGCCCGGTCCGGTACCGATGGCCGACCTGGTGGTGTCGACGCTGCCCGCCGGCGCGGCGGACGGGCTGGAGCCGCCGGCCGGATCGGTGCTGCTCGACGTGGTCTACGCGCCCTGGCCCACGCCGTTCGCGGTCGCCGCCGAGGCGGCCGGTGGCACGGTGGTCAGCGGGCTGGCGATGCTGCTGCACCAGGCCGCCGCGCAGGTCGAGCTGATGACCGGCCGGACCGCGCCGGTGCCGGCGATGCGGGCCGCGCTGGATGCCGCGGTTCGAGCGCGATCGGAGAAGCCACCGGCACCGACCACACCCTAG
PROTEIN sequence
Length: 275
VRAAVLGRPVGHSLSPVLHTAAYAALGLPDWSYTAVDCGEQELPGLLAGLGPEWAGLSLTMPLKRAALAVADSVDPLAAAVGSANTLLLGGGRRAYTTDVAGIAEALREAGLTAPRSAVVLGAGGTAQAALAALAGLGLDAAVVLVRDPARAGQLRATADRIGIALDLRAGLPGPVPMADLVVSTLPAGAADGLEPPAGSVLLDVVYAPWPTPFAVAAEAAGGTVVSGLAMLLHQAAAQVELMTGRTAPVPAMRAALDAAVRARSEKPPAPTTP*