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PLM2_5_b1_sep16_scaffold_9053

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_9053_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
hypothetical protein Tax=Nocardiopsis halotolerans RepID=UPI00034B78B4
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWA2_Burkholderiales_64_37_curated
PLM2_5_b1_sep16_scaffold_9053_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(296..1120)
DNA (825bp) protein (275aa)
Shikimate dehydrogenase substrate binding domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0W0_PSEUX
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EXG81321.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
shikimate dehydrogenase substrate binding domain-containing protein
PLM2_5_b1_sep16_scaffold_9053_3
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1122..1958)
DNA (837bp) protein (279aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ACU36019.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ACU36019.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
3-hydroxybutyryl-CoA dehydrogenase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGV1_ACTMD
PLM2_5_b1_sep16_scaffold_9053_4
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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2030..2491
DNA (462bp) protein (154aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB06
PLM2_5_b1_sep16_scaffold_9053_5
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2494..3186
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WF26_ACTMD
Uncharacterized protein {ECO:0000313|EMBL:KEP22518.1}; species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_9053_6
unknown

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3140..3295
DNA (156bp) protein (52aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_9053_7
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3443..3655
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z2F6_MYCSD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM2_5_b1_sep16_scaffold_9053_8
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3652..4041
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
Ribonuclease VapC Tax=Gordonia araii NBRC 100433 RepID=G7GYD2_9ACTO
PilT protein domain-containing protein
PLM2_5_b1_sep16_scaffold_9053_9
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4046..4864)
DNA (819bp) protein (273aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036973BA
fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase
Fructose-1,6-bisphosphatase {ECO:0000313|EMBL:AEW96433.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM2_5_b1_sep16_scaffold_9053_10
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4880..5317
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Janibacter hoylei PVAS-1 RepID=K1E619_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EKA62541.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
NUDIX hydrolase
PLM2_5_b1_sep16_scaffold_9053_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5307..6170)
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Putative ribosome biogenesis GTPase RsgA Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACI9_THECD
GTPase EngC
PLM2_5_b1_sep16_scaffold_9053_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(6356..7498)
DNA (1143bp) protein (381aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=AROA_ACIC1
Displaying 12 items

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