ggKbase home page

PLM2_5_b1_sep16_scaffold_9053_8

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 3652..4041

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 129.0
  • Bit_score: 114
  • Evalue 6.40e-23
Ribonuclease VapC Tax=Gordonia araii NBRC 100433 RepID=G7GYD2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 129.0
  • Bit_score: 114
  • Evalue 4.60e-23
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 113
  • Evalue 3.80e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gordonia araii → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGATCCTCGTCGACACCTCGGCCTGGACGGAATACCTGCGCGGCACCGGGTCAGGGGCCCACTTCCGGCTGCGCGAGCTGCTCGCCGCCGACGCCGTGCTCGGCACGACCGACGTCGTGCACATGGAGCTGCTGGCCGGGTCCAGGACCGAGACCGACGACCTGCAGCTGCGCCGGATGCTGGCCGCGATGGACCACGTCCCGGTCGACCCGGTGGACTGGGAGACCGCGGCCCGGCTGCACCGCACCTGCGAGCGCAGCGGCGAGAGCGTCTACTCGCTGACCGACTGCCTGGTCGCGGCGGTGGCGATCCGGGTCGGCGCGCCCGTGCTCGCGCACGACCGCGACTTCGTCCTGCTCGCCCGGCACACCGACCTCGAGCTGGCCTGA
PROTEIN sequence
Length: 130
MILVDTSAWTEYLRGTGSGAHFRLRELLAADAVLGTTDVVHMELLAGSRTETDDLQLRRMLAAMDHVPVDPVDWETAARLHRTCERSGESVYSLTDCLVAAVAIRVGAPVLAHDRDFVLLARHTDLELA*