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PLM2_5_b1_sep16_scaffold_11597

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_11597_1
unknown

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comp(151..408)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_11597_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(545..1486)
DNA (942bp) protein (314aa)
gshB; glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
Glutathione synthetase Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=GSHB_BRADU
PLM2_5_b1_sep16_scaffold_11597_3
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1527..1940)
DNA (414bp) protein (138aa)
UPF0102 protein C207_04042 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GYZ0_9BRAD
UPF0102 protein UB31_25680 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_11597_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1927..2922)
DNA (996bp) protein (332aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
16S rRNA (-2'-O)-methyltransferase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HD38_9BRAD
hypothetical protein
PLM2_5_b1_sep16_scaffold_11597_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3163..4377
DNA (1215bp) protein (405aa)
ethanolamine utilization protein EutM Tax=Bradyrhizobium elkanii RepID=UPI0002F9CB14
Ethanolamine utilization protein EutM {ECO:0000313|EMBL:KJC47495.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
extracellular ligand-binding receptor
PLM2_5_b1_sep16_scaffold_11597_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4387..5610)
DNA (1224bp) protein (408aa)
coproporphyrinogen III oxidase Tax=Bradyrhizobium elkanii RepID=UPI00036AD3FA
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ERF82690.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
coproporphyrinogen III oxidase
PLM2_5_b1_sep16_scaffold_11597_7
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5597..6232)
DNA (636bp) protein (212aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Non-canonical purine NTP pyrophosphatase Tax=Bradyrhizobium sp. STM 3843 RepID=H0TNW1_9BRAD
deoxyribonucleotide triphosphate pyrophosphatase
PLM2_5_b1_sep16_scaffold_11597_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6285..6764)
DNA (480bp) protein (160aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GYZ6_9BRAD
Displaying 8 items

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