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PLM2_5_b1_sep16_scaffold_1317_16

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(12743..13270)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 173.0
  • Bit_score: 325
  • Evalue 4.20e-86
Peptide deformylase Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=DEF_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 173.0
  • Bit_score: 325
  • Evalue 3.00e-86
def; peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 173.0
  • Bit_score: 325
  • Evalue 8.50e-87

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Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGCCATTCGCGAAATCATCATCCTGCCGGACAAACAGTTGCGGCTCGTCTCCAAACCCATTGAGAAAGTCACGGCGGAGGTTCGCAAGCTCGCCGACGACATGTTCGAGACCATGTACGACGCGCCCGGGATCGGGCTCGCCGCGATCCAGGTCGCCCAGCCGCTGCGGCTGATCACGATGGATCTCGCCAAAAGGGACGAGGACGGCGAGAGCAAGCCGCGGCCGCGCGTCTTCATCAATCCGGAAATACTGTCGTCGTCGGAGGAACTGTCGGTTTACGAGGAAGGCTGCCTGTCGATCCCGGAATATTACGAGGAAGTGGAGCGGCCGGCGCAGGTGCGGGTGCGCTTCACCGATCTCGACGGCAAGGTGCACGAGGAAGACGCCGAGGGCCTGTTCGCCACCTGCATCCAGCATGAGATCGATCATCTCAACGGCGTGTTGTTCGTGGATTATCTGTCGAAGCTGAAGCGCGACCGCGTGCTGAAGAAGTTTGCAAAAGCCGCCAAGCGTGCGGTGGAGTAG
PROTEIN sequence
Length: 176
MAIREIIILPDKQLRLVSKPIEKVTAEVRKLADDMFETMYDAPGIGLAAIQVAQPLRLITMDLAKRDEDGESKPRPRVFINPEILSSSEELSVYEEGCLSIPEYYEEVERPAQVRVRFTDLDGKVHEEDAEGLFATCIQHEIDHLNGVLFVDYLSKLKRDRVLKKFAKAAKRAVE*