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PLM2_5_b1_sep16_scaffold_4219

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_4219_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1..786)
DNA (786bp) protein (262aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_4219_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(788..1516)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H2J2_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_4219_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1513..2226)
DNA (714bp) protein (238aa)
Methyltransferase type 11 Tax=Frankia sp. CN3 RepID=G6H2J3_9ACTO
type 11 methyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_4219_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2250..2663
DNA (414bp) protein (138aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_4219_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2673..2957
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDJ4_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_4219_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

3218..3736
DNA (519bp) protein (173aa)
transcriptional regulator Tax=Sinorhizobium medicae RepID=UPI000380502D
MarR family transcriptional regulator
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM2_5_b1_sep16_scaffold_4219_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3750..4676
DNA (927bp) protein (309aa)
L-proline dehydrogenase bin=GWA2_Ignavibacteriae_54_16_partial species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
L-proline dehydrogenase
Tax=GWA2_Ignavibacteria_54_16_curated
PLM2_5_b1_sep16_scaffold_4219_8

Not on your lists

4673..5638
DNA (966bp) protein (322aa)
gabT2; 4-aminobutyrate transaminase (EC:2.6.1.19)
Aminotransferase class-III Tax=mine drainage metagenome RepID=E6PC59_9ZZZZ
Aminotransferase class-III {ECO:0000313|EMBL:CBH74042.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM2_5_b1_sep16_scaffold_4219_9
unknown

Not on your lists

5932..6849
DNA (918bp) protein (306aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4219_10
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6846..7478)
DNA (633bp) protein (211aa)
Methyltransferase Tax=Burkholderia vietnamiensis AU4i RepID=U2HLC8_BURVI
Methyltransferase {ECO:0000313|EMBL:ERJ41279.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_4219_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7478..8215)
DNA (738bp) protein (246aa)
fabL; enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
Uncharacterized protein Tax=Brevibacillus sp. BC25 RepID=J2FSY1_9BACL
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_4219_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8212..8490)
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E902_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_4219_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8522..9424
DNA (903bp) protein (301aa)
membrane protein Tax=Bacillus cereus RepID=UPI0003476102
transporter, EamA family
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_4219_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9424..10956
DNA (1533bp) protein (511aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEZ2_CONWI
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB51709.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_4219_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10953..12050
DNA (1098bp) protein (366aa)
hppD; 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase Tax=Microscilla marina ATCC 23134 RepID=A1ZF21_9BACT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_4219_16
unknown

Not on your lists

comp(12047..12586)
DNA (540bp) protein (180aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4219_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12658..13149)
DNA (492bp) protein (164aa)
FMN-binding pyridoxamine 5'-phosphate oxidase-like protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative pyridoxamine 5'-phosphate oxidase-related, FMN-binding core
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM2_5_b1_sep16_scaffold_4219_18
Bacillus sp. TH008, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13201..13980
DNA (780bp) protein (260aa)
hypothetical protein Tax=Paenibacillus elgii RepID=UPI000248CE8B
Uncharacterized protein {ECO:0000313|EMBL:KKB74312.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TH008.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_4219_19
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14058..14669
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EI07_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84319.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
PLM2_5_b1_sep16_scaffold_4219_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14724..15305
DNA (582bp) protein (194aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B503B5
cation diffusion facilitator family transporter
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 20 items

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