ggKbase home page

PLM2_30_b1_sep16_scaffold_4071

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_4071_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..293
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGA4_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77228.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM2_30_b1_sep16_scaffold_4071_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

410..976
DNA (567bp) protein (189aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM2_30_b1_sep16_scaffold_4071_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1673..2320
DNA (648bp) protein (216aa)
TetR family transcriptional regulator Tax=Burkholderia sp. JPY251 RepID=UPI00036BFA47
HTH-type transcriptional repressor dhaR {ECO:0000313|EMBL:CCE10086.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
transcriptional regulator
PLM2_30_b1_sep16_scaffold_4071_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2323..2841
DNA (519bp) protein (173aa)
hypothetical protein
hypothetical protein bin=bin1_lowGC species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM2_30_b1_sep16_scaffold_4071_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

2855..3841
DNA (987bp) protein (329aa)
proline iminopeptidase
Proline iminopeptidase {ECO:0000313|EMBL:AIE87662.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Peptidase family S33 bin=GWF2_Bacteroidetes_33_16 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
PLM2_30_b1_sep16_scaffold_4071_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

3955..4434
DNA (480bp) protein (160aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003782F2C
ketosteroid isomerase-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM2_30_b1_sep16_scaffold_4071_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4649..4900
DNA (252bp) protein (84aa)
Xaa-Pro dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase {ECO:0000313|EMBL:ACB77358.1}; EC=3.4.13.9 {ECO:0000313|EMBL:ACB77358.1};; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Xaa-Pro dipeptidase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A022_OPITP
PLM2_30_b1_sep16_scaffold_4071_8
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5006..5632
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MSW7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EMF28738.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_4071_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

5711..6151
DNA (441bp) protein (147aa)
hypothetical protein bin=bin3_NC10 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM2_30_b1_sep16_scaffold_4071_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6482..6745)
DNA (264bp) protein (88aa)
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:EDY17009.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EDY17009.1};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
non-specific serine/threonine protein kinase (EC:2.7.11.1)
Non-specific serine/threonine protein kinase Tax=Chthoniobacter flavus Ellin428 RepID=B4D9A6_9BACT
Displaying 10 items

View Taxonomy