ggKbase home page

PLM2_30_b1_sep16_scaffold_1780

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1780_1
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..889)
DNA (888bp) protein (296aa)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
3-dehydroquinate synthase Tax=Verrucomicrobium spinosum RepID=UPI000174537E
3-dehydroquinate synthase
PLM2_30_b1_sep16_scaffold_1780_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(871..1671)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DCI6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY15862.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
prepilin-type N-terminal cleavage/methylation domain
PLM2_30_b1_sep16_scaffold_1780_3
unknown

Not on your lists

comp(1678..1794)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_1780_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1853..2101
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D099_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20413.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_1780_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2164..3285)
DNA (1122bp) protein (374aa)
DNA polymerase III, delta subunit Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F9_9BACT
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDY19571.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA polymerase III subunit delta
PLM2_30_b1_sep16_scaffold_1780_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3376..5625)
DNA (2250bp) protein (750aa)
UvrABC system protein B Tax=Chthoniobacter flavus Ellin428 RepID=B4D1F3_9BACT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
excinuclease ABC subunit B
PLM2_30_b1_sep16_scaffold_1780_7

Not on your lists

5724..7769
DNA (2046bp) protein (682aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B70BDB
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49069.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1780_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7894..9573
DNA (1680bp) protein (560aa)
Tetratricopeptide repeat domain protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPL6_9BACT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_30_b1_sep16_scaffold_1780_9
unknown

Not on your lists

comp(9574..9675)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 9 items

View Taxonomy