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PLM2_30_b1_sep16_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_77_1
unknown

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_77_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(121..1968)
DNA (1848bp) protein (616aa)
Sulfate adenylyltransferase, large subunit {ECO:0000313|EMBL:EEF59180.1}; EC=2.7.1.25 {ECO:0000313|EMBL:EEF59180.1};; EC=2.7.7.4 {ECO:0000313|EMBL:EEF59180.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Sulfate adenylyltransferase, large subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XLS3_9BACT
sulfate adenylyltransferase large subunit
PLM2_30_b1_sep16_scaffold_77_3
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(2072..2890)
DNA (819bp) protein (273aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00037876D3
Sulfate adenylyltransferase {ECO:0000313|EMBL:KIE58893.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
cysH; sulfate adenylyltransferase subunit 2
PLM2_30_b1_sep16_scaffold_77_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3059..3595
DNA (537bp) protein (179aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NADH-quinone oxidoreductase subunit B Tax=Chthoniobacter flavus Ellin428 RepID=B4D4P6_9BACT
nuoB; NADH dehydrogenase subunit B
PLM2_30_b1_sep16_scaffold_77_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3663..4238
DNA (576bp) protein (192aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NADH-quinone oxidoreductase subunit C Tax=Chthoniobacter flavus Ellin428 RepID=B4D4P5_9BACT
nuoC; NADH dehydrogenase subunit C
PLM2_30_b1_sep16_scaffold_77_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4273..5856)
DNA (1584bp) protein (528aa)
Metal dependent phosphohydrolase Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP5_9BACT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EDY16147.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
membrane-associated HD superfamily hydrolase
PLM2_30_b1_sep16_scaffold_77_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5922..6896)
DNA (975bp) protein (325aa)
PhoH family protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP6_9BACT
PhoH family protein {ECO:0000313|EMBL:EDY16148.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phoH; phosphate starvation-inducible protein PhoH, predicted ATPase
PLM2_30_b1_sep16_scaffold_77_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6980..7429)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16149.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_77_9

Not on your lists

comp(7438..8391)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIA12454.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_77_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8397..9410
DNA (1014bp) protein (338aa)
ADP-heptose synthase Tax=Verrucomicrobium spinosum RepID=UPI000174528C
rfaE; D-glycero-beta-D-manno-heptose 7-phosphate kinase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_77_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9403..9990
DNA (588bp) protein (196aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase Tax=Chthoniobacter flavus Ellin428 RepID=B4D317_9BACT
PLM2_30_b1_sep16_scaffold_77_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10101..10853
DNA (753bp) protein (251aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D316_9BACT
PLM2_30_b1_sep16_scaffold_77_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10850..12523
DNA (1674bp) protein (558aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase Tax=Chthoniobacter flavus Ellin428 RepID=B4D315_9BACT
PLM2_30_b1_sep16_scaffold_77_14
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12444..13451)
DNA (1008bp) protein (336aa)
translation factor Sua5 Tax=Verrucomicrobium spinosum RepID=UPI0001745EB3
Sua5/YciO/YrdC/YwlC family protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM2_30_b1_sep16_scaffold_77_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13448..13939)
DNA (492bp) protein (164aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Chthoniobacter flavus Ellin428 RepID=B4D534_9BACT
PLM2_30_b1_sep16_scaffold_77_16
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14039..14575
DNA (537bp) protein (179aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000255|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000255|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000255|HAMAP-Rule:MF_00109};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
Shikimate kinase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=AROK_THEYD
PLM2_30_b1_sep16_scaffold_77_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14625..15710
DNA (1086bp) protein (362aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Epoxyqueuosine reductase Tax=Chthoniobacter flavus Ellin428 RepID=B4D532_9BACT
hypothetical protein
PLM2_30_b1_sep16_scaffold_77_18
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

15781..17139
DNA (1359bp) protein (453aa)
Efflux transporter, RND family, MFP subunit Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUN7_OPITP
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB74921.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM2_30_b1_sep16_scaffold_77_19
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

17154..17900
DNA (747bp) protein (249aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
ABC transporter related Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUN8_OPITP
ABC transporter-like protein
PLM2_30_b1_sep16_scaffold_77_20
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

17908..19158
DNA (1251bp) protein (417aa)
Putative uncharacterized protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QVA2_CHLT3
ABC transporter {ECO:0000313|EMBL:KER11046.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_77_21
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

19166..20407
DNA (1242bp) protein (414aa)
Putative uncharacterized protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QVA1_CHLT3
ABC transporter {ECO:0000313|EMBL:KER11047.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_77_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20582..21850)
DNA (1269bp) protein (423aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Adenylosuccinate lyase Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X9_9BACT
purB; adenylosuccinate lyase
PLM2_30_b1_sep16_scaffold_77_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(22046..22291)
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19742.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_77_24
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(22497..23054)
DNA (558bp) protein (186aa)
hypothetical protein bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM2_30_b1_sep16_scaffold_77_25
R_Gammaproteobacteria_41_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23118..24998
DNA (1881bp) protein (627aa)
ABC transporter-related protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y1_9BACT
mdlB; multidrug ABC transporter ATPase/permease
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_15_curated
PLM2_30_b1_sep16_scaffold_77_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

24985..25569
DNA (585bp) protein (195aa)
Transferase hexapeptide repeat containing protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y2_9BACT
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:EDY19744.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_77_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25637..26809
DNA (1173bp) protein (391aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19745.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_77_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27026..28642
DNA (1617bp) protein (539aa)
2-alkenal reductase {ECO:0000313|EMBL:EDY21492.1}; EC=1.3.1.74 {ECO:0000313|EMBL:EDY21492.1};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
2-alkenal reductase (EC:1.3.1.74)
2-alkenal reductase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVQ0_9BACT
PLM2_30_b1_sep16_scaffold_77_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

28644..30143
DNA (1500bp) protein (500aa)
PDZ/DHR/GLGF domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP9_9BACT
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:EDY21491.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_77_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(30180..31616)
DNA (1437bp) protein (479aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18813.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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