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PLM2_30_b1_sep16_scaffold_233

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_233_1
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3..434
DNA (432bp) protein (144aa)
Tax=RBG_16_Actinobacteria_68_21_curated
PLM2_30_b1_sep16_scaffold_233_2
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(590..1960)
DNA (1371bp) protein (457aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGN0_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK16582.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM2_30_b1_sep16_scaffold_233_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2116..4098
DNA (1983bp) protein (661aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037036D2
DNA-binding protein with winged-HTH domain {ECO:0000313|EMBL:CDM65449.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transcriptional regulator domain-containing protein
PLM2_30_b1_sep16_scaffold_233_4
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(4254..4679)
DNA (426bp) protein (142aa)
Phenylalanine-4-hydroxylase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KP07_SOLCM
phenylalanine-4-hydroxylase
Tax=RBG_16_Zixibacteria_50_21_curated
PLM2_30_b1_sep16_scaffold_233_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(4651..6006)
DNA (1356bp) protein (452aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003660069
phenylalanine-4-hydroxylase
Tax=RBG_16_Zixibacteria_50_21_curated
PLM2_30_b1_sep16_scaffold_233_6
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(6188..8194)
DNA (2007bp) protein (669aa)
Putative secreted or membrane protein Tax=Rhodopirellula europaea SH398 RepID=M5RY94_9PLAN
hypothetical protein
Tax=RBG_16_Planctomycetes_59_8_curated
PLM2_30_b1_sep16_scaffold_233_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8199..8732)
DNA (534bp) protein (178aa)
RNA polymerase sigma factor Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VEB2_CAUST
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM2_30_b1_sep16_scaffold_233_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8885..9859)
DNA (975bp) protein (325aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D337_9BACT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY19148.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ErfK/YbiS/YcfS/YnhG family protein
PLM2_30_b1_sep16_scaffold_233_9
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9995..11872)
DNA (1878bp) protein (626aa)
Malto-oligosyltrehalose trehalohydrolase Tax=Desulfovibrio sp. U5L RepID=I2PYG6_9DELT
alpha-amylase-family protein
Tax=GWB2_Desulfobacterales_56_26_curated
PLM2_30_b1_sep16_scaffold_233_10
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

12081..13094
DNA (1014bp) protein (338aa)
Uncharacterized protein bin=GWF2_Planctomycete_41_51 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
PLM2_30_b1_sep16_scaffold_233_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13268..14209
DNA (942bp) protein (314aa)
Predicted NADPH:quinone reductase (Alcohol dehydrogenase superfamily) Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1R5_UNCMA
Putative NADPH:quinone reductase (Alcohol dehydrogenase superfamily) {ECO:0000313|EMBL:EYF08305.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
NADPH:quinone reductase
PLM2_30_b1_sep16_scaffold_233_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14243..14755
DNA (513bp) protein (171aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037E0AE7
Tax=RBG_16_Gamma2_60_9_curated
PLM2_30_b1_sep16_scaffold_233_13
unknown

Not on your lists

comp(14906..15355)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_233_14
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15476..16663
DNA (1188bp) protein (396aa)
succinyl-CoA synthetase, beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta Tax=Chthoniobacter flavus Ellin428 RepID=B4D5D9_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_233_15
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16660..17742
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00036916EA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM2_30_b1_sep16_scaffold_233_16
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17739..18122
DNA (384bp) protein (128aa)
glyoxalase Tax=Verrucomicrobium spinosum RepID=UPI000174591B
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AHF90050.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM2_30_b1_sep16_scaffold_233_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18119..18478
DNA (360bp) protein (120aa)
glyoxalase Tax=Verrucomicrobium spinosum RepID=UPI000174591B
glyoxalase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EDY18345.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_233_18
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18599..19480
DNA (882bp) protein (294aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=Akkermansia sp. CAG:344 RepID=R7DXE6_9BACT
succinyl-CoA synthetase, alpha subunit
PLM2_30_b1_sep16_scaffold_233_19
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19701..20066
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q624_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ73028.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
lipid A biosynthesis domain-containing protein
PLM2_30_b1_sep16_scaffold_233_20
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(20115..22715)
DNA (2601bp) protein (867aa)
DNA gyrase subunit A Tax=Pedosphaera parvula Ellin514 RepID=B9XGG7_9BACT
gyrA; DNA gyrase subunit A
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_233_21
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22846..23625)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Mesorhizobium sp. L2C089B000 RepID=V7GX93_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ04429.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_233_22
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(23631..26195)
DNA (2565bp) protein (855aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B Tax=Pedosphaera parvula Ellin514 RepID=B9XGG8_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Displaying 22 items

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