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PLM2_30_b1_sep16_scaffold_444

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_444_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..260)
DNA (258bp) protein (86aa)
Aminotransferase class-III Tax=Chthoniobacter flavus Ellin428 RepID=B4DAF8_9BACT
Aminotransferase class-III {ECO:0000313|EMBL:EDY16619.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
argD; Ornithine/acetylornithine aminotransferase
PLM2_30_b1_sep16_scaffold_444_2

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comp(299..805)
DNA (507bp) protein (169aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49065.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM2_30_b1_sep16_scaffold_444_3
unknown

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comp(918..1274)
DNA (357bp) protein (119aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001746B0B
PLM2_30_b1_sep16_scaffold_444_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1447..3756
DNA (2310bp) protein (770aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Phosphoribosylformylglycinamidine synthase 2 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY1_9BACT
purL; protein PurL
PLM2_30_b1_sep16_scaffold_444_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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3757..4569
DNA (813bp) protein (271aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI0003716980
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM2_30_b1_sep16_scaffold_444_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4611..6113
DNA (1503bp) protein (501aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Amidophosphoribosyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVD3_9BACT
purF; glutamine phosphoribosylpyrophosphate amidotransferase
PLM2_30_b1_sep16_scaffold_444_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6118..7296
DNA (1179bp) protein (393aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVD4_9BACT
PLM2_30_b1_sep16_scaffold_444_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7424..10045)
DNA (2622bp) protein (874aa)
Glycosyltransferase Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DVV3_METI4
wcaA; glycosyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_444_9
unknown

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10195..10662
DNA (468bp) protein (156aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_444_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10829..12217)
DNA (1389bp) protein (463aa)
Membrane-associated phosphatase, PAP2_like_Aur1 family, and protein serine/threonine/tyrosine phosphatase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0U1_PELCD
membrane-associated phosphatase, PAP2_like_Aur1 family, and protein serine/threonine/tyrosine phosphatase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM2_30_b1_sep16_scaffold_444_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12195..13958)
DNA (1764bp) protein (588aa)
hypothetical protein bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ynbC; lysophospholipase and SAM-dependent methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM2_30_b1_sep16_scaffold_444_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13945..14673)
DNA (729bp) protein (243aa)
Acyltransferase Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVW0_9PROT
Acyltransferase {ECO:0000313|EMBL:EHM02883.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
PLM2_30_b1_sep16_scaffold_444_13
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14670..15626)
DNA (957bp) protein (319aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:EFH12386.1}; EC=2.7.7.41 {ECO:0000313|EMBL:EFH12386.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Phosphatidate cytidylyltransferase Tax=Synechocystis sp. PCC 7509 RepID=L8KUA4_9SYNC
CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
PLM2_30_b1_sep16_scaffold_444_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15623..16288)
DNA (666bp) protein (222aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase protein Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J9F8_AGRRK
pgsAb; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase protein {ECO:0000313|EMBL:ACM27560.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
PLM2_30_b1_sep16_scaffold_444_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16395..16769
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJ55_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60093.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_444_16
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16778..17242
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Bradyrhizobium sp. S23321 RepID=I0GC20_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL78307.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
Displaying 16 items

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