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PLM2_30_b1_sep16_scaffold_667

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_667_1
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1960)
DNA (1959bp) protein (653aa)
Putative glycosyltransferase Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YC80_THIV6
putative glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:KFN43082.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
PLM2_30_b1_sep16_scaffold_667_2
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2180..2929
DNA (750bp) protein (250aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
ribonuclease PH Tax=Verrucomicrobium spinosum RepID=UPI00017448CA
ribonuclease PH
PLM2_30_b1_sep16_scaffold_667_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3020..4033
DNA (1014bp) protein (338aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase Tax=Chthoniobacter flavus Ellin428 RepID=B4D1U8_9BACT
PLM2_30_b1_sep16_scaffold_667_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4111..4776)
DNA (666bp) protein (222aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3P8_9BACT
ErfK/YbiS/YcfS/YnhG family protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_667_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4773..5636)
DNA (864bp) protein (288aa)
Hydrolase, TatD family Tax=Chthoniobacter flavus Ellin428 RepID=B4D4Q0_9BACT
Hydrolase, TatD family {ECO:0000313|EMBL:EDY18503.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tatD; Mg-dependent DNase
PLM2_30_b1_sep16_scaffold_667_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5719..6741)
DNA (1023bp) protein (341aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4Q1_9BACT
3-oxoacyl-ACP synthase
PLM2_30_b1_sep16_scaffold_667_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6704..7735)
DNA (1032bp) protein (344aa)
Phosphate acyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D4Q2_9BACT
plsX; Fatty acid/phospholipid biosynthesis enzyme
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_667_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8109..8558)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001746903
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_667_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8572..9048)
DNA (477bp) protein (159aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Phosphopantetheine adenylyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D4Q5_9BACT
phosphopantetheine adenylyltransferase
PLM2_30_b1_sep16_scaffold_667_10
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9109..9993
DNA (885bp) protein (295aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JZF3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72577.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
universal stress protein
PLM2_30_b1_sep16_scaffold_667_11
Leptospira santarosai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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10068..10829
DNA (762bp) protein (254aa)
TIGR02206 family protein Tax=Leptospira santarosai str. MOR084 RepID=K6GBW3_9LEPT
TIGR02206 family protein {ECO:0000313|EMBL:EKO34525.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira santarosai str. MOR084.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_667_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10880..11683
DNA (804bp) protein (268aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Chthoniobacter flavus Ellin428 RepID=B4D5S1_9BACT
2-dehydro-3-deoxyphosphooctonate aldolase
PLM2_30_b1_sep16_scaffold_667_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11667..12230
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D5S0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18123.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_667_14
unknown

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12227..12958
DNA (732bp) protein (244aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_667_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12955..13740
DNA (786bp) protein (262aa)
ABC transporter-related protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D5R6_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY18119.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
yhbG; ABC transporter ATPase
PLM2_30_b1_sep16_scaffold_667_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13971..14897
DNA (927bp) protein (309aa)
Sodium/hydrogen exchanger Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDZ8_DESAR
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:BAP57952.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PLM2_30_b1_sep16_scaffold_667_17
RLO_PLX_64_10, Bacteria

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14860..15285
DNA (426bp) protein (142aa)
Sodium/hydrogen exchanger Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDZ8_DESAR
sodium/hydrogen exchanger
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM2_30_b1_sep16_scaffold_667_18
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15293..15640
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Methylovorus RepID=C6XC83_METSD
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM2_30_b1_sep16_scaffold_667_19
RLO_RIF05_58_11, RIF5, Bacteria

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15660..16364
DNA (705bp) protein (235aa)
hemerythrin hhE cation binding domain-containing protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM2_30_b1_sep16_scaffold_667_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16433..17431
DNA (999bp) protein (333aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
HPr kinase/phosphorylase Tax=Chthoniobacter flavus Ellin428 RepID=B4D5T4_9BACT
hprK; Serine kinase of the HPr protein, regulates carbohydrate metabolism
PLM2_30_b1_sep16_scaffold_667_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17431..17742
DNA (312bp) protein (104aa)
Phosphotransferase system, phosphocarrier protein HPr Tax=Chthoniobacter flavus Ellin428 RepID=B4D5T5_9BACT
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:EDY18138.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphotransferase system, phosphocarrier protein HPr
PLM2_30_b1_sep16_scaffold_667_22
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

17844..19613
DNA (1770bp) protein (590aa)
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
PLM2_30_b1_sep16_scaffold_667_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19685..20212)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CYK3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20544.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_667_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20309..22264
DNA (1956bp) protein (652aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Biosynthetic arginine decarboxylase Tax=Chthoniobacter flavus Ellin428 RepID=B4CYK5_9BACT
arginine decarboxylase
PLM2_30_b1_sep16_scaffold_667_25
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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22397..22975
DNA (579bp) protein (193aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XX2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85493.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM2_30_b1_sep16_scaffold_667_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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22972..24276
DNA (1305bp) protein (435aa)
Pyrrolo-quinoline quinone Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XX1_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ85494.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM2_30_b1_sep16_scaffold_667_27
unknown

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comp(24454..24690)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 27 items

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