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PLM2_30_b1_sep16_scaffold_682

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_682_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(107..913)
DNA (807bp) protein (269aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EDY21752.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EDY21752.1};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, 1A family Tax=Chthoniobacter flavus Ellin428 RepID=B4CWG0_9BACT
PLM2_30_b1_sep16_scaffold_682_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(858..2198)
DNA (1341bp) protein (447aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EDY21752.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EDY21752.1};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Penicillin-binding protein, 1A family Tax=Chthoniobacter flavus Ellin428 RepID=B4CWG0_9BACT
Multimodular transpeptidase-transglycosylase
PLM2_30_b1_sep16_scaffold_682_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2318..2653)
DNA (336bp) protein (112aa)
glutaredoxin Tax=Verrucomicrobium spinosum RepID=UPI0001746BEC
glutaredoxin
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_682_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2772..2957)
DNA (186bp) protein (62aa)
CsbD family protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D508_9BACT
CsbD family protein {ECO:0000313|EMBL:EDY18611.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
CsbD family protein
PLM2_30_b1_sep16_scaffold_682_5
unknown

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comp(2966..3199)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_682_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3364..3963)
DNA (600bp) protein (200aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sigma70-ECF: RNA polymerase sigma factor, sigma-70 family
PLM2_30_b1_sep16_scaffold_682_7
unknown

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comp(4626..4898)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_682_8
unknown

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5027..5416
DNA (390bp) protein (130aa)
hypothetical protein
PLM2_30_b1_sep16_scaffold_682_9
unknown

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5564..5782
DNA (219bp) protein (73aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_682_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6222..7778
DNA (1557bp) protein (519aa)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:EEF59965.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EEF59965.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Putative circadian clock protein, KaiC Tax=Pedosphaera parvula Ellin514 RepID=B9XJT9_9BACT
hypothetical protein
PLM2_30_b1_sep16_scaffold_682_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7787..9121
DNA (1335bp) protein (445aa)
PAS/PAC sensor signal transduction histidine kinase Tax=Chthoniobacter flavus Ellin428 RepID=B4DA10_9BACT
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:EDY16637.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sensor signal transduction histidine kinase
PLM2_30_b1_sep16_scaffold_682_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9269..9967
DNA (699bp) protein (233aa)
Two component transcriptional regulator, LuxR family Tax=Chthoniobacter flavus Ellin428 RepID=B4CUU9_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY22337.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
two component LuxR family transcriptional regulator
PLM2_30_b1_sep16_scaffold_682_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10135..11058
DNA (924bp) protein (308aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:EDY20708.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EDY20708.1};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
serine acetyltransferase Tax=Verrucomicrobium spinosum RepID=UPI0001745ABA
serine acetyltransferase
PLM2_30_b1_sep16_scaffold_682_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11055..12209
DNA (1155bp) protein (385aa)
iscS2; cysteine desulfurase IscS (EC:2.8.1.7)
Aminotransferase class V Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ15_9BACT
Aminotransferase class V {ECO:0000313|EMBL:EDY20706.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_682_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12196..12843
DNA (648bp) protein (216aa)
Aminotransferase class V Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ15_9BACT
Aminotransferase class V {ECO:0000313|EMBL:EDY20706.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_682_16

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comp(12873..13889)
DNA (1017bp) protein (339aa)
peptide chain release factor 2 Tax=Verrucomicrobium spinosum RepID=UPI0001744B49
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
peptide chain release factor 2
PLM2_30_b1_sep16_scaffold_682_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(14093..14458)
DNA (366bp) protein (122aa)
Septum formation initiator Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Y8_9BACT
Septum formation initiator {ECO:0000313|EMBL:EDY18968.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_682_18
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(14459..15328)
DNA (870bp) protein (290aa)
Phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
Enolase Tax=Akkermansia muciniphila CAG:154 RepID=R6JXD9_9BACT
Displaying 18 items

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