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PLM4_65_b1_redo_sep16_scaffold_7182

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7182_1
R_NC10_66_22, NC10, Bacteria

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1..267
DNA (267bp) protein (89aa)
prsA; Foldase protein PrsA (EC:5.2.1.8) bin=bin9_gal15 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
peptidylprolyl cis-trans isomerase (EC:5.2.1.8)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_7182_2
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1223..1414
DNA (192bp) protein (64aa)
DNA polymerase beta domain protein region Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ74_DESAR
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEB09246.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
PLM4_65_b1_redo_sep16_scaffold_7182_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1539..1871
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIT7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69444.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_7182_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1868..2293
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIT6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX00068.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_7182_5
R_NC10_66_22, NC10, Bacteria

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comp(2402..2854)
DNA (453bp) protein (151aa)
def; peptide deformylase (PDF) (Polypeptide deformylase) (EC:3.5.1.31)
Peptide deformylase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJM0_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_7182_6
R_NC10_66_22, NC10, Bacteria

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comp(2866..3900)
DNA (1035bp) protein (345aa)
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL9_9BACT
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_7182_7
R_NC10_66_22, NC10, Bacteria

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comp(3997..5340)
DNA (1344bp) protein (448aa)
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102)
Carboxy-terminal-processing protease (C-terminal-processing protease) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL8_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_7182_8
R_NC10_66_22, NC10, Bacteria

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comp(5487..6686)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_7182_9
R_NC10_66_22, NC10, Bacteria

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comp(6792..7685)
DNA (894bp) protein (298aa)
Cell division protein FtsX Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL6_9BACT
Cell division protein FtsX
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_7182_10
R_NC10_66_22, NC10, Bacteria

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comp(7729..8391)
DNA (663bp) protein (221aa)
ftsE; cell division ABC transporter ATP-binding protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ftsE; cell division ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_7182_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(8679..9452)
DNA (774bp) protein (258aa)
Putative Methyltransferase type 11 Tax=Nitrolancetus hollandicus Lb RepID=I4EG69_9CHLR
Putative Methyltransferase type 11 {ECO:0000313|EMBL:CCF83681.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
UbiE/COQ5 methyltransferase
PLM4_65_b1_redo_sep16_scaffold_7182_12
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10025..11194
DNA (1170bp) protein (390aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI000377C34A
Saccharopine dehydrogenase {ECO:0000313|EMBL:ESZ19793.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
saccharopine dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_7182_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11351..12148
DNA (798bp) protein (266aa)
UPI0003D05B5F related cluster Tax=unknown RepID=UPI0003D05B5F
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ19794.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
family 3 extracellular solute-binding protein
PLM4_65_b1_redo_sep16_scaffold_7182_14
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12254..12922
DNA (669bp) protein (223aa)
ABC-type amino acid transporter, permease component Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QA55_DESAH
amino acid ABC transporter permease
ABC-type amino acid transporter, permease component {ECO:0000313|EMBL:ACN14640.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
PLM4_65_b1_redo_sep16_scaffold_7182_15
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12939..13607
DNA (669bp) protein (223aa)
Polar amino acid ABC transporter, inner membrane subunit Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AX54_RHILS
polar amino acid ABC transcriptional regulator inner membrane protein
Tax=RBG_13_Deltaproteobacteria_49_15_curated
PLM4_65_b1_redo_sep16_scaffold_7182_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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13952..14416
DNA (465bp) protein (155aa)
Major facilitator family transporter Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHD3_9BACT
Major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:CBE69165.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 16 items

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