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PLM4_65_b1_redo_sep16_scaffold_3810

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3810_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(7..1815)
DNA (1809bp) protein (603aa)
kdpA; high-affinity potassium transport system P-type ATPase, , A chain (EC:3.6.3.9)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Potassium-transporting ATPase A chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJC7_9BACT
PLM4_65_b1_redo_sep16_scaffold_3810_2
unknown

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comp(1812..1904)
DNA (93bp) protein (31aa)
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3810_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2007..3950)
DNA (1944bp) protein (648aa)
Amino acid permease-associated region Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJC4_9BACT
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:CBE67489.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3810_4
unknown

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comp(4088..4180)
DNA (93bp) protein (31aa)
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3810_5
unknown

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comp(4739..4960)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3810_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5020..5418)
DNA (399bp) protein (133aa)
Predicted protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_3810_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(5655..8057)
DNA (2403bp) protein (801aa)
Putative transmembrane sensor domain protein Tax=Microcoleus sp. PCC 7113 RepID=K9W8I1_9CYAN
transmembrane sensor domain-containing protein
Putative transmembrane sensor domain protein {ECO:0000313|EMBL:AFZ16111.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM4_65_b1_redo_sep16_scaffold_3810_8
CSP1_5_NC10, NC10, Bacteria

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comp(8250..8882)
DNA (633bp) protein (211aa)
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase bin=bin3_NC10 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin3_NC10 organism_group=NC10
conserved protein of unknown function, containing cAMP/cGMP-dependent protein kinase and Cyclic nucleotide-binding domain
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_3810_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(9052..9618)
DNA (567bp) protein (189aa)
Small-conductance mechanosensitive channel Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9PB84_CYAGP
small-conductance mechanosensitive channel
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_3810_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(9618..10307)
DNA (690bp) protein (230aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_3810_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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10725..12398
DNA (1674bp) protein (558aa)
Histidine kinase (EC:2.7.13.3) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Histidine kinase (EC:2.7.13.3)
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_3810_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12419..13792
DNA (1374bp) protein (458aa)
hisitidine kinase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003708D99
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator {ECO:0000313|EMBL:CBE68916.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3810_13
CSP1_5_NC10, NC10, Bacteria

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comp(13890..15017)
DNA (1128bp) protein (376aa)
Multi-sensor signal transduction histidine kinase (EC:2.7.3.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
sensory box/GGDEF family protein
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_3810_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(15118..15414)
DNA (297bp) protein (99aa)
Putative uncharacterized protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VS14_9CYAN
cupin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_b1_redo_sep16_scaffold_3810_15
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(15472..15774)
DNA (303bp) protein (101aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
paaG; Enoyl-CoA hydratase bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM4_65_b1_redo_sep16_scaffold_3810_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15774..16121)
DNA (348bp) protein (116aa)
Enoyl-CoA hydratase/carnithine racemase Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSR2_MESAW
enoyl-CoA hydratase/carnithine racemase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
PLM4_65_b1_redo_sep16_scaffold_3810_17
unknown

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comp(16112..16264)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3810_18
unknown

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16623..17168
DNA (546bp) protein (182aa)

This feature has no annotations

Displaying 18 items

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