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PLM4_65_b1_redo_sep16_scaffold_5304

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5304_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1..180)
DNA (180bp) protein (60aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:CBE68403.1};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
tRNA pseudouridine synthase A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF74_9BACT
PLM4_65_b1_redo_sep16_scaffold_5304_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(305..1327)
DNA (1023bp) protein (341aa)
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000313|EMBL:CBE68402.1};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Aspartate-semialdehyde dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF73_9BACT
PLM4_65_b1_redo_sep16_scaffold_5304_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1371..2918)
DNA (1548bp) protein (516aa)
leuA; 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (EC:2.3.3.13)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
2-isopropylmalate synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF72_9BACT
PLM4_65_b1_redo_sep16_scaffold_5304_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2974..3771)
DNA (798bp) protein (266aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:CBE68400.1}; EC=2.7.8.8 {ECO:0000313|EMBL:CBE68400.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF71_9BACT
PLM4_65_b1_redo_sep16_scaffold_5304_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3768..4394)
DNA (627bp) protein (209aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphatidylserine decarboxylase proenzyme Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF70_9BACT
PLM4_65_b1_redo_sep16_scaffold_5304_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4493..7150)
DNA (2658bp) protein (886aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Alanine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF60_9BACT
PLM4_65_b1_redo_sep16_scaffold_5304_7
unknown

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7267..7758
DNA (492bp) protein (164aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5304_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(7626..8765)
DNA (1140bp) protein (380aa)
Twitching mobility protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF58_9BACT
pilT; Twitching mobility protein
Twitching mobility protein {ECO:0000313|EMBL:CBE68387.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_5304_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8818..9870)
DNA (1053bp) protein (351aa)
Protein RecA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF57_9BACT
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_5304_10
unknown

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comp(9953..10243)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5304_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10361..12232
DNA (1872bp) protein (624aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF31_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68360.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_5304_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12229..13596
DNA (1368bp) protein (456aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF29_9BACT
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator {ECO:0000313|EMBL:CBE68358.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 12 items

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