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PLM4_65_b1_redo_sep16_scaffold_1050

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1050_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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473..1702
DNA (1230bp) protein (410aa)
O-methyltransferase family 2 Tax=mine drainage metagenome RepID=T0ZV06_9ZZZZ
smtA; SAM-dependent methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_1050_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1827..2663
DNA (837bp) protein (279aa)
oxidoreductase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like monooxygenase
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_1050_3
unknown

Not on your lists

3069..3329
DNA (261bp) protein (87aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1050_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3310..4737)
DNA (1428bp) protein (476aa)
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] bin=bin3_NC10 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
succinate-semialdehyde dehydrogenase
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_1050_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(4751..5893)
DNA (1143bp) protein (381aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBE68263.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBE68263.1};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Histidinol-phosphate aminotransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET4_9BACT
PLM4_65_b1_redo_sep16_scaffold_1050_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(5895..8498)
DNA (2604bp) protein (868aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIP7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69404.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8547..9506)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIP8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69405.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9558..10544)
DNA (987bp) protein (329aa)
Putative ABC transporter protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIP9_9BACT
ABC transporter protein
Putative ABC transporter protein {ECO:0000313|EMBL:CBE69406.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10528..11508)
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIQ0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69407.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(11528..12484)
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIQ1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69408.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(12502..13428)
DNA (927bp) protein (309aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIQ2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69409.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(13687..14361)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIQ5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69412.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14738..15109)
DNA (372bp) protein (124aa)
GCN5-related N-acetyltransferase bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_1050_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(15520..16068)
DNA (549bp) protein (183aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Adenine phosphoribosyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFA8_9BACT
PLM4_65_b1_redo_sep16_scaffold_1050_15
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(16065..16562)
DNA (498bp) protein (166aa)
Hypothetical conserved protein Tax=uncultured prokaryote RepID=H5SIR4_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM4_65_b1_redo_sep16_scaffold_1050_trna_2
unknown

Not on your lists

comp(16685..16758)
DNA (74bp)
transferRNA Pro
PLM4_65_b1_redo_sep16_scaffold_1050_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(16762..17406)
DNA (645bp) protein (215aa)
pcm; protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090, ECO:0000313|EMBL:CBE68439.1};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
protein-L-isoaspartate O-methyltransferase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003606815
PLM4_65_b1_redo_sep16_scaffold_1050_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(17491..18312)
DNA (822bp) protein (274aa)
surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase)(survival protein, protein damage control) (EC:3.1.3.5)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060, ECO:0000313|EMBL:CBE68440.1};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
5'-nucleotidase SurE Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB1_9BACT
PLM4_65_b1_redo_sep16_scaffold_1050_trna_1
unknown

Not on your lists

comp(18386..18459)
DNA (74bp)
transferRNA Pro
PLM4_65_b1_redo_sep16_scaffold_1050_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(18479..18907)
DNA (429bp) protein (143aa)
Uncharacterized HTH-type transcriptional regulator in himA 3'region (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB2_9BACT
hypothetical protein
Uncharacterized HTH-type transcriptional regulator in himA 3'region (Modular protein) {ECO:0000313|EMBL:CBE68441.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18920..19198)
DNA (279bp) protein (93aa)
DNA-binding protein HU (DNA-binding protein II) (HB) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB3_9BACT
hup; DNA-binding protein HU (DNA-binding protein II) (HB)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_1050_20
unknown

Not on your lists

comp(19262..20137)
DNA (876bp) protein (292aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1050_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(20137..21534)
DNA (1398bp) protein (466aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003814B88
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1050_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(21723..22925)
DNA (1203bp) protein (401aa)
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1)
Aspartate aminotransferase A (AspAT) {ECO:0000313|EMBL:CBE68448.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CBE68448.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Aspartate aminotransferase A (AspAT) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB9_9BACT
PLM4_65_b1_redo_sep16_scaffold_1050_23
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(22922..23440)
DNA (519bp) protein (173aa)
coaD; phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase) (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
phosphopantetheine adenylyltransferase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003741030
PLM4_65_b1_redo_sep16_scaffold_1050_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(23437..23994)
DNA (558bp) protein (186aa)
Putative methyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC1_9BACT
yhhF; methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:CBE68450.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_25
R_NC10_66_22, NC10, Bacteria

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24111..24314
DNA (204bp) protein (68aa)
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L28
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_1050_26
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(24328..26499)
DNA (2172bp) protein (724aa)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp synthetase I) ((P)ppGpp synthetase) {ECO:0000313|EMBL:CBE68452.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CBE68452.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp synthetase I) ((P)ppGpp synthetase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC3_9BACT
PLM4_65_b1_redo_sep16_scaffold_1050_27
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(26525..27262)
DNA (738bp) protein (246aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000375B796
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68453.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1050_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(27223..28449)
DNA (1227bp) protein (409aa)
Extracellular ligand-binding receptor Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC5_9BACT
Extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CBE68454.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying items 1-30 of 39 in total

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