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PLM4_65_b1_redo_sep16_scaffold_6734

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6734_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6734_2
R_KAZAN_45_19, Kazan, Bacteria

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783..1550
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MCZ5_9EURY
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_KAZAN_45_19_curated
PLM4_65_b1_redo_sep16_scaffold_6734_3
unknown

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comp(1446..1688)
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6734_4
unknown

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1948..2451
DNA (504bp) protein (168aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6734_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2946..3782
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM14_9BACT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
PLM4_65_b1_redo_sep16_scaffold_6734_6
unknown

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comp(3862..4857)
DNA (996bp) protein (332aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6734_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5162..5467
DNA (306bp) protein (102aa)
Type I antifreeze protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR0_9BACT
type I antifreeze protein
Type I antifreeze protein {ECO:0000313|EMBL:CBE69645.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_6734_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5696..6367)
DNA (672bp) protein (224aa)
Fructose-2,6-bisphosphatase bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha-ribazole phosphatase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_6734_9
R_NC10_66_22, NC10, Bacteria

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comp(6447..6917)
DNA (471bp) protein (157aa)
Thioesterase superfamily protein Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T8K9_9DELT
thioesterase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_6734_10
unknown

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comp(6998..7090)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6734_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(7095..7922)
DNA (828bp) protein (276aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIW1_9BACT
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6734_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(7919..9184)
DNA (1266bp) protein (422aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) (EC:3.5.4.28)
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) {ECO:0000313|EMBL:CBE69648.1}; EC=3.5.4.28 {ECO:0000313|EMBL:CBE69648.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIW5_9BACT
PLM4_65_b1_redo_sep16_scaffold_6734_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9219..9818)
DNA (600bp) protein (200aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Probable molybdenum cofactor guanylyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIW8_9BACT
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A
PLM4_65_b1_redo_sep16_scaffold_6734_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(9822..10262)
DNA (441bp) protein (147aa)
DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (Transcriptase subunit omega) (RNA polymerase omega subunit) (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA-directed RNA polymerase subunit omega Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIX0_9BACT
PLM4_65_b1_redo_sep16_scaffold_6734_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10278..10886)
DNA (609bp) protein (203aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Guanylate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIX3_9BACT
PLM4_65_b1_redo_sep16_scaffold_6734_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10902..11168)
DNA (267bp) protein (89aa)
UPF0296 protein DAMO_2579 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIX6_9BACT
hypothetical protein
UPF0296 protein DAMO_2579 {ECO:0000256|HAMAP-Rule:MF_01503}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_6734_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(11184..12065)
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIX8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69653.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_6734_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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12110..14956
DNA (2847bp) protein (949aa)
Fis family transcriptional regulator bin=CNBR_ACIDO species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NifA subfamily transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 18 items

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