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PLM4_65_b1_redo_sep16_scaffold_2901

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2901_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(214..2406)
DNA (2193bp) protein (731aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHN5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99522.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM4_65_b1_redo_sep16_scaffold_2901_2
unknown

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comp(2476..3024)
DNA (549bp) protein (183aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2901_3
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(3472..3921)
DNA (450bp) protein (150aa)
Thiol:disulfide interchange protein DsbA Tax=uncultured Acidobacteria bacterium RepID=H5SDA7_9BACT
DSBA oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM4_65_b1_redo_sep16_scaffold_2901_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3952..4353)
DNA (402bp) protein (134aa)
Thiol:disulfide interchange protein DsbA Tax=uncultured Acidobacteria bacterium RepID=H5SDA7_9BACT
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_2901_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4745..6148)
DNA (1404bp) protein (468aa)
Putative capsular polysaccharide synthesis protein (CpsA) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIZ7_9BACT
capsular polysaccharide synthesis protein (cpsA)
Putative capsular polysaccharide synthesis protein (CpsA) {ECO:0000313|EMBL:CBE67362.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2901_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(6142..7350)
DNA (1209bp) protein (403aa)
Glycosyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIZ6_9BACT
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBE67361.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2901_7
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(7347..8099)
DNA (753bp) protein (251aa)
Methyltransferase type 11 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAU7_METSL
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADZ08973.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
PLM4_65_b1_redo_sep16_scaffold_2901_8

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comp(8096..9547)
DNA (1452bp) protein (484aa)
Polysaccharide biosynthesis protein Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAX7_METIK
Uncharacterized protein {ECO:0000313|EMBL:KKK88567.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
polysaccharide biosynthesis protein
PLM4_65_b1_redo_sep16_scaffold_2901_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9656..10651)
DNA (996bp) protein (332aa)
Putative Glycosyl transferase, family 2 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIZ5_9BACT
Glycosyl transferase, family 2
Putative Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBE67360.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2901_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(10817..12688)
DNA (1872bp) protein (624aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003825F8C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2901_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12685..13761)
DNA (1077bp) protein (359aa)
hypothetical protein, partial Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036AC808
BNR repeat-containing glycosyl hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2901_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(13889..14758)
DNA (870bp) protein (290aa)
Spore coat polysaccharide biosynthesis protein spsK Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIZ2_9BACT
spsK; Spore coat polysaccharide biosynthesis protein spsK
Spore coat polysaccharide biosynthesis protein spsK {ECO:0000313|EMBL:CBE67357.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2901_13
RLO_PER_ii_53_10, PER-ii, Bacteria

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comp(14929..16149)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_52_8 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
putative GDSL-lipase
Tax=RIFCSPLOWO2_12_FULL_PER_ii_53_10_curated
PLM4_65_b1_redo_sep16_scaffold_2901_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(16233..16412)
DNA (180bp) protein (60aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_2901_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(16418..18217)
DNA (1800bp) protein (600aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
carbamoyltransferase
Tax=CSP1_2_Dadabacteria
PLM4_65_b1_redo_sep16_scaffold_2901_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(18229..18492)
DNA (264bp) protein (88aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
Displaying 16 items

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