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PLM4_65_b1_redo_sep16_scaffold_2970

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2970_1
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

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comp(164..598)
DNA (435bp) protein (145aa)
Hypothetical conserved protein Tax=Crenarchaeota RepID=H5SVV7_9CREN
putative nucleic acid-binding protein contains PIN domain
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
PLM4_65_b1_redo_sep16_scaffold_2970_2
unknown

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comp(598..849)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2970_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(924..2456)
DNA (1533bp) protein (511aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
GMP synthase [glutamine-hydrolyzing] Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML81_9BACT
PLM4_65_b1_redo_sep16_scaffold_2970_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2605..4068)
DNA (1464bp) protein (488aa)
guaB; inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Inosine-5'-monophosphate dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML79_9BACT
PLM4_65_b1_redo_sep16_scaffold_2970_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4231..5217)
DNA (987bp) protein (329aa)
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) {ECO:0000313|EMBL:CBE69920.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CBE69920.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML78_9BACT
PLM4_65_b1_redo_sep16_scaffold_2970_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5242..5883)
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML77_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69919.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2970_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5953..7254)
DNA (1302bp) protein (434aa)
tRNA cytidylyltransferase (EC:2.7.7.72)
Putative tRNA cytidylyltransferase {ECO:0000313|EMBL:CBE69918.1}; EC=2.7.7.21 {ECO:0000313|EMBL:CBE69918.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative tRNA cytidylyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML76_9BACT
PLM4_65_b1_redo_sep16_scaffold_2970_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(7301..8197)
DNA (897bp) protein (299aa)
Tyrosine recombinase XerD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MME9_9BACT
xerD; tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2970_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8198..9388)
DNA (1191bp) protein (397aa)
Putative Glycosyl transferase, group 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF0_9BACT
Glycosyl transferase, group 1
Putative Glycosyl transferase, group 1 {ECO:0000313|EMBL:CBE70072.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2970_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9498..11072)
DNA (1575bp) protein (525aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF1_9BACT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70073.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2970_11
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11125..11364)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GWP2_CUPNN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI81762.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
PLM4_65_b1_redo_sep16_scaffold_2970_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(11923..13284)
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Nitrospirae_57_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Fis family transcriptional regulator
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_b1_redo_sep16_scaffold_2970_13
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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comp(13299..15173)
DNA (1875bp) protein (625aa)
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MR62_9BACT
sensor histidine kinase, Cache_1 and HAMP domain-containing
Tax=RBG_16_Zixibacteria_40_9_curated
PLM4_65_b1_redo_sep16_scaffold_2970_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(15170..15940)
DNA (771bp) protein (257aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF2_9BACT
type 4 prepilin-like proteins leader peptide processing enzyme
PLM4_65_b1_redo_sep16_scaffold_2970_15
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(15945..16616)
DNA (672bp) protein (224aa)
hypothetical protein bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_2970_16
R_NC10_66_22, NC10, Bacteria

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comp(16613..17377)
DNA (765bp) protein (255aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin3_NC10 organism_group=NC10
putative ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_2970_17
R_NC10_66_22, NC10, Bacteria

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comp(17374..18309)
DNA (936bp) protein (312aa)
ABC transporter ATPase (EC:3.6.3.-)
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 17 items

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