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PLM4_65_b1_redo_sep16_scaffold_23222

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_23222_1
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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3..383
DNA (381bp) protein (127aa)
Lysophospholipase (EC:3.1.1.5)
UPI0003C8D0A1 related cluster Tax=unknown RepID=UPI0003C8D0A1
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM4_65_b1_redo_sep16_scaffold_23222_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(397..1176)
DNA (780bp) protein (260aa)
Phosphonate ABC transporter, ATPase subunit bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphonate ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_23222_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1173..2087)
DNA (915bp) protein (305aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alkylphosphonate ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_23222_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2109..2957)
DNA (849bp) protein (283aa)
Tetratricopeptide TPR_2 repeat protein bin=GWD2_Deltaproteobacteria_55_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_23222_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2961..3332)
DNA (372bp) protein (124aa)
acyl-CoA hydrolase (EC:3.1.2.-)
Acyl-CoA hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_23222_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3395..4312)
DNA (918bp) protein (306aa)
Branched-chain amino acid aminotransferase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
branched-chain amino acid aminotransferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_23222_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4431..4700)
DNA (270bp) protein (90aa)
DNA-binding protein HU 2 Tax=Nitrospina gracilis 3/211 RepID=M1YVU2_9BACT
hup; DNA-binding protein HU
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_23222_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4818..5753)
DNA (936bp) protein (312aa)
Ppx/GppA phosphatase family protein Tax=Pyramidobacter piscolens W5455 RepID=D1Y839_9BACT
Ppx/GppA phosphatase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_23222_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5750..6235)
DNA (486bp) protein (162aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Tax=Acetonema longum DSM 6540 RepID=F7NL32_9FIRM
gid; tRNA (uracil-5-)-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 9 items

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