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PLM4_65_b1_redo_sep16_scaffold_18677

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_18677_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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1..1503
DNA (1503bp) protein (501aa)
ABC transporter related Tax=Roseiflexus sp. (strain RS-1) RepID=A5UR27_ROSS1
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABQ89080.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM4_65_b1_redo_sep16_scaffold_18677_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1686..2117
DNA (432bp) protein (144aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_18677_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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2122..2658
DNA (537bp) protein (179aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_18677_4
unknown

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comp(3007..3141)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_18677_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3497..4786
DNA (1290bp) protein (430aa)
Sensor protein (EC:2.7.13.3)
Putative Sensor protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFS3_9BACT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_65_b1_redo_sep16_scaffold_18677_6
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4735..4989
DNA (255bp) protein (85aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
Integral membrane sensor signal transduction histidine kinase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6M3_DESAT
integral membrane sensor signal transduction histidine kinase
PLM4_65_b1_redo_sep16_scaffold_18677_7
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4986..6374
DNA (1389bp) protein (463aa)
Sigma-54 dependent response regulator Tax=Candidatus Nitrospira defluvii RepID=D8P7Y0_9BACT
sigma-54 dependent response regulator
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_65_b1_redo_sep16_scaffold_18677_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6421..7620)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_18677_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7751..8512)
DNA (762bp) protein (254aa)
Enoyl-CoA hydratase Tax=uncultured prokaryote RepID=H5SLH0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETX05662.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
enoyl-CoA hydratase/carnithine racemase
PLM4_65_b1_redo_sep16_scaffold_18677_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8663..9442)
DNA (780bp) protein (260aa)
Citrate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
citrate synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_18677_11

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9744..10988
DNA (1245bp) protein (415aa)
CoA-transferase (EC:2.8.3.-)
Putative acyl-CoA transferases/carnitine dehydratase Tax=uncultured archaeon A07HB70 RepID=V4Y6I9_9ARCH
Putative acyl-CoA transferases/carnitine dehydratase {ECO:0000313|EMBL:ESS06682.1}; species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
PLM4_65_b1_redo_sep16_scaffold_18677_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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11214..11666
DNA (453bp) protein (151aa)
id=1940952 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 12 items

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