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PLM4_65_b1_redo_sep16_scaffold_18890

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_18890_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..299)
DNA (297bp) protein (99aa)
L-threonine 3-dehydrogenase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT82_PSEUX
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_18890_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(409..1494)
DNA (1086bp) protein (362aa)
Amidohydrolase 2 Tax=Frankia sp. (strain EuI1c) RepID=E3J7T4_FRASU
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_18890_3
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

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1684..1938
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Bdellovibrio exovorus JSS RepID=M4V5L3_9DELT
hypothetical protein
Tax=RBG_16_Bdellovibrionales_40_8_curated
PLM4_65_b1_redo_sep16_scaffold_18890_4
Pyrenophora tritici-repentis, Pyrenophora, Pleosporales, Pleosporomycetidae, Ascomycota, Fungi

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2661..5561
DNA (2901bp) protein (967aa)
Predicted protein Tax=Pyrenophora tritici-repentis (strain Pt-1C-BFP) RepID=B2W3G7_PYRTR
Predicted protein {ECO:0000313|EMBL:EDU47924.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora.;" source="Pyrenophora tritici-repentis (strain Pt-1C-BFP) (Wheat tan spot; fungus) (Drechslera tritici-repentis).;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_18890_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5656..6612)
DNA (957bp) protein (319aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_18890_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6829..7392)
DNA (564bp) protein (188aa)
Putative phosphonopyruvate decarboxylase bin=GWA2_OP3_52_12 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
thiamine pyrophosphate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_18890_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7405..7899)
DNA (495bp) protein (165aa)
sulfopyruvate decarboxylase (EC:4.1.1.79)
Sulfopyruvate decarboxylase subunit alpha bin=GWD2_Deltaproteobacteria_55_8 species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_18890_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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8047..9051
DNA (1005bp) protein (335aa)
Hemolysin III Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDC0_9BRAD
Tricarboxylate transport protein TctC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_18890_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9286..9747
DNA (462bp) protein (154aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tripartite tricarboxylate transporter TctB family
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_18890_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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9749..11227
DNA (1479bp) protein (493aa)
Tricarboxylate transport membrane protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 10 items

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